fstpackage / fstcore Goto Github PK

#6 1783.9 * installing *source* package ‘fstcore’ ...
#6 1783.9 ** package ‘fstcore’ successfully unpacked and MD5 sums checked
#6 1783.9 ** using staged installation
#6 1783.9 0.29.1
#6 1783.9 Package liblz4 was not found in the pkg-config search path.
#6 1783.9 Perhaps you should add the directory containing `liblz4.pc'
#6 1783.9 to the PKG_CONFIG_PATH environment variable
#6 1783.9 No package 'liblz4' found
#6 1783.9 Package liblz4 was not found in the pkg-config search path.
#6 1783.9 Perhaps you should add the directory containing `liblz4.pc'
#6 1783.9 to the PKG_CONFIG_PATH environment variable
#6 1783.9 No package 'liblz4' found
#6 1783.9 Using PKG_CFLAGS= and PKG_LIBS=-llz4
#6 1783.9 ------------------------- ANTICONF ERROR ---------------------------
#6 1783.9 Configuration failed because liblz4 was not found. Try installing:
#6 1783.9  * deb: liblz4-dev (Debian, Ubuntu, etc)
#6 1783.9  * rpm: liblz4-devel (Fedora, CentOS, RHEL)
#6 1783.9  * csw: liblz4_dev (Solaris)
#6 1783.9  * OSX: lz4 (macOS)
#6 1783.9 If liblz4 is already installed, check that 'pkg-config' is in your
#6 1783.9 PATH and PKG_CONFIG_PATH contains a liblz4.pc file. If pkg-config
#6 1783.9 is unavailable you can set INCLUDE_LZ4_DIR and LIB_LZ4_DIR manually via:
#6 1783.9 R CMD INSTALL --configure-vars='INCLUDE_LZ4_DIR=... LIB_LZ4_DIR=...'
#6 1783.9 Alternatively, you can build the required libraries directly from bundled code by
#6 1783.9 setting BUILD_INTERNAL_LIBS to true
#6 1783.9 --------------------------------------------------------------------
#6 1783.9 ERROR: configuration failed for package ‘fstcore’

.Call(fstcore:::`_fstcore_fstretrieve`, normalizePath(f), "V1", as.integer(2^31-10), NULL)

template <typename T>
SEXP fstretrieve(Rcpp::String fileName, SEXP columnSelection, SEXP startRow, SEXP endRow, T* buffer, SEXP len);

// or

SEXP fstretrieve(Rcpp::String fileName, SEXP columnSelection, SEXP startRow, SEXP endRow, SEXP buffer, SEXP start);

Found pkg-config cflags and libs for LZ4!
Using PKG_CFLAGS=  and PKG_LIBS=-llz4 
1.8.0
Package libzstd was not found in the pkg-config search path.
Perhaps you should add the directory containing `libzstd.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libzstd', required by 'virtual:world', not found
Package libzstd was not found in the pkg-config search path.
Perhaps you should add the directory containing `libzstd.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libzstd', required by 'virtual:world', not found
Using PKG_CFLAGS=  and PKG_LIBS=-lzstd
------------------------- ANTICONF ERROR ---------------------------
Configuration failed because libzstd was not found. Try installing:
 * deb: libzstd-dev (Debian, Ubuntu, etc)
 * rpm: libzstd-devel (Fedora, CentOS, RHEL)
 * csw: libzstd-dev (Solaris)
 * OSX: zstd (macOS)
If libzstd is already installed, check that 'pkg-config' is in your
PATH and PKG_CONFIG_PATH contains a libzstd.pc file. If pkg-config
is unavailable you can set INCLUDE_ZSTD_DIR and LIB_ZSTD_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_ZSTD_DIR=... LIB_ZSTD_DIR=...'
Alternatively, you can build the required libraries directly from bundled code by
setting BUILD_INTERNAL_LIBS to true
--------------------------------------------------------------------
ERROR: configuration failed for package ‘fstcore’
* removing ‘/home/yifanliu/R/x86_64-redhat-linux-gnu-library/4.1/fstcore’
* restoring previous ‘/home/yifanliu/R/x86_64-redhat-linux-gnu-library/4.1/fstcore’

R version 4.1.2 (2021-11-01)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: Fedora Linux 35 (Workstation Edition)

Matrix products: default
BLAS/LAPACK: /usr/lib64/libflexiblas.so.3.1

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8       
 [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
[10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_4.1.2 tools_4.1.2