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Implementation of algorithms used in hidden markov models.

files:

  • backward.py: an implementation of the backward algorithm that computes the likelihood of an observation given parameters. It is computed recursively backwards from time T to time 0.
  • baum_welch.py: an implementation of the baum-welch algorithm used to estimate the parameters that maximize the likelihood of an observation.
  • example.ipynb: examples on how to use the algorithms.
  • forward.py: an implementation of the forward algorithm that computes the likelihood of an observation given parameters. It is computed recursively forwards from time 0 to time T.
  • viterbi.py: an implementation of the viterbi algorithm that decodes the most likely hidden states that led to a sequence of observations.
  • requirements.txt: contains required python modules to run the algorithms

To learn more about each algorithm check out my notes.

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