fair-research / deriva-action-provider Goto Github PK

The JSON schema used for ingest is being updated to simplify the data provided. For internal vocabularies, (subject_role_taxonomy.role_id and subject.granularity) these will be represented as enumerations in the schema.

The external vocabularies, (biosample.anatomy, biosample.anatomy.assay_type, file.file_format, and file.data_type) will stop having foreign keys. The tables will be created using code to collect the descriptive information.