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pssr_docker's Introduction

PSSR_docker

Build

git clone --recurse-submodules https://github.com/eriksf/PSSR_docker.git
or
git clone https://github.com/eriksf/PSSR_docker.git
git submodule update --init --recursive
and
docker build -t eriksf/pssr:<version> .

Current usage

docker run -v ${DIR_WITH_TIF}:/data/test/PSSR/stats -v ${DIR_MODELS}:/data/test/PSSR/models eriksf/pssr:0.0.0 ${PWD} ${MODEL_FILE_NAME} ${SIZE}

Example

docker run -v ${DIR_WITH_TIF}:/data/test/PSSR/stats -v ${DIR_MODELS}:/data/test/PSSR/models eriksf/pssr:0.0.0 . PSSR_for_EM_1024.pkl 1024

singularity exec --cleanenv --nv pssr_0.0.0.sif /usr/local/bin/entrypoint.sh python /data/inference.py $WORKDIR $modelf $size

pssr_docker's People

Contributors

eriksf avatar

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