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mimic3-benchmarks

Python suite to construct benchmark machine learning datasets from the MIMIC-III clinical database.

mimic_trajectories

ml-analyst

Analysis pipeline for quick ML analyses.

mrsman

Medical Record System Management

omnirep

The OMNIREP algorithm: Coevolving encodings and representations

openmrs-module-coreapps

Provides apps for performing the common tasks

openmrs-module-fhir

Implements REST and Java APIs to access OpenMRS via FHIR Specification.

penn-lpc-scripts

Scripts that I wrote for use on the Penn LPC

pennai-arm64-deps

Pre-compiled dependencies for building PennAI Docker images on 64-bit ARM OSs (e.g., raspberry pi)

pennai-bioinformatics

Code to reproduce the experiments in "Evaluating recommender systems for AI-driven biomedical informatics"

pennai-ed

Materials for PennAI-Ed - an initiative to enhance AI and data science education built on PennAI

pennai-ed-gen

Fork of `pi-gen` used to build Raspberry Pi OS images for PennAI-Ed

picv

Proportional instance cross validation

pmlb

PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.

pmlb-manuscript

Manuscript for PMLB v1.0

pmlbr

pmlb is an R interface to the Penn Machine Learning Benchmarks data repository

process-ukbb

psb2024_spine

qsar-gnn

rebate

Relief Based Algorithms of ReBATE implemented in Python with Cython optimization. This repository is no longer being updated. Please see scikit-rebate.

rebate-benchmark

A centralized repository to benchmark ReBATE performance across a variety of parameter settings and datasets.

regens

Recombines real genomic segments to simulate whole genomes

regens-analysis

safe

The SAFE Algorithm: Solution and Fitness Evolution

scikit-mdr

A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.

scikit-rebate

A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.

simplemodelview

A Unity package for a simplified model-view system to help with code<->UI management.

star_outliers

star_outliers_analysis

star_outliers_figure_and_table_generation