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ac_clusterless_decoding

analysis_template

Python template for data analysis

atom

:atom: The hackable text editor

better-science-code

A presentation on best coding/data management practices based on my own experiences of scientific computing and data analysis and heavily borrowing from the recommendations of many others. View presentation at: https://edeno.github.io/Better-Science-Code

bu-scc-files

Files for the BU SCC cluster environment

categorize-replay-2017

celest-matlab-tutorial

Matlab tutorial for CELEST summer interns

characterizing-hippocampal-replay-using-hybrid-point-process-state-space-models

clearmap2

ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap

cloudtogrid

Example of converting a 2d point cloud to a 2d grid via the assignment problem.

cnso-d3-presentation

communication-by-coherence

conda-auto-env

Automatically activate a conda environment when entering a folder with an environment.yml file

cosyne-2016-abstract

SpectraVis abstract for Cosyne Conference

d3-save-svg

Extracts an SVG node and accompanying styles from an HTML document and allows you to download it all as an SVG file.

deeplabcut

Markerless tracking of user-defined features with deep learning

dynamic-decoding-using-state-space-modeling

edeno

edeno-website

franklab_sorting_pipeline

Developing spike sorting pipeline for use in franklab

git-introduction

A brief introduction to git and GitHub

gl-spyglass-tables

Gillespie Lab Spyglass tables

hdmf

The Hierarchical Data Modeling Framework

hungarian

Hungarian / Munkres' algorithm for the linear assignment problem, in Python

iohmm

Input Output Hidden Markov Model (IOHMM) in Python

islc-2015-presentation

jadhav-2016-data-analysis

Code for analysis on data from Jadhav et al. 2016

jax

Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

jg_clusterless_decoding

latent_dynamics_workshop

Exercises and examples for the latent dynamics workshop