duydn Goto Github PK

abiotrans

A Biostatistical tool for Transcriptomics Analysis

alphapeel

AlphaPeel: calling, phasing, and imputing genotype and sequence data in pedigrees

angiosperm-time-tree-2.0

animal-breeding-plans

"Animal Breeding Plans, Third Edition, Sixth Printing" by Professor Jay L. Lush of Iowa State University.

auto-gpt

An experimental open-source attempt to make GPT-4 fully autonomous.

awesome_bigdata_ai_drugdiscovery

A collection of resources useful for leveraging big data and AI for drug discovery. It mainly serves as an orientation for new lab folks. It may be biased towards my lab interest.

babelomics

bayesr

Bayesian hierarchical model for complex trait analysis

bello-text-miner

A simple yet effective text mining tool for analyzing corpora

bigrf

Random forests for R for large data sets, optimized with parallel tree-growing and disk-based memory

bioinformatics-ca.github.io

repository for student workshop pages

bqtl

This repo contains scripts used in the fecal and nasal Hutterite QTL project.

breedr

Statistical methods for forest genetic resources analysts

broom

Convert statistical analysis objects from R into tidy format

callings-nf

GATK RNA-Seq Variant Calling in Nextflow

cancerdriver

cc-slurm

This profile configures Snakemake to run on Compute Canada with SLURM (e.g. graham).

cellchat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

cernanetsim

Simulation of interactions miRNA:Competing Targets

cfrna-seq-pipeline-ngo-manuscript-2019

This pipeline contains the data processing steps used for Thuy Ngo's 2019 cell-free RNA manuscript

choirbm

Plotting and analytic utilities for the CHOIR Body Map.

clinker

Gene cluster comparison figure generator

cmplot

📊 Circular and Rectangular Manhattan Plot

come

COME software version 1

community-gists

In this repository, you will find all the code from our blog posts, social posts, videos and so on.

corenet

A network-based approach to using single cell RNA-seq for comparing cell types

coursera

Practical in coursea

covid19drugstrendtracker

cregulome

An R package to access, manage and visualize regulome (microRNA/transcription factors)-gene correlations in cancer

cregulomedb

Build the database file for cRegulome package