drfaisal Goto Github PK

fasten-onprem

Fasten is an open-source, self-hosted, personal/family electronic medical record aggregator, designed to integrate with 100,000's of insurances/hospitals/clinics

genomic_epi_2017

Course contents for Infectious Disease Genomic Epidemiology 2017

genomic_med_2017

ht-biology_2017

Course contents for High-Throughput Biology: From Sequence to Networks 2017 hosted at CSHL

htseq_2017

intermine

A powerful open source data warehouse system

intror

intror_2017

medplum

Medplum is a healthcare platform that helps you quickly develop high-quality compliant applications.

metabolomics_2017

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

mimic-iv-data-pipeline

A customizable pipeline for data extraction from MIMIC-IV.

myfun

ngs-course.github.io

NGS course

opensafely

testing

opensafely1

pathways_2017

predictworkshop

Development and Validation of Clinical Prediction Models using R: A one day workshop

predictworkshop.github.io

py

Repository to store sample python programs for python learning

pyhealth

A Deep Learning Python Toolkit for Healthcare Applications.

python_for_microscopists

https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

r-files-from-youtube

R and Data Files from my YouTube Channel

rnaseq_2017

stat2data

Datasets for the Stat2 Textbook

taste

Code accompanying our ACM CHIL paper: "TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records"

test_r

testpack

starting with package development

umlsjs

:heartpulse: npm package for accessing UMLS REST APIs (unofficial)