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parsnipA tidy unified interface to models https://tidymodels.github.io/parsnip/
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paper: A pitfall for machine learning methods aiming to predict across cell types
- Getting started with deep learning in R blog post from Rstudio.
- deep learning biology
- Bayesian deep learning for single-cell analysis
- A primer on deep learning in genomics
- Selene: a PyTorch-based deep learning library for biological sequence-level data
- Janggu - Deep learning for Genomics
- Dive into Deep Learning An interactive deep learning book for students, engineers, and researchers.
- SingleCellNet: a computational tool to classify single cell RNA-Seq data across platforms and across species
- ONNX is a open format to represent deep learning models. With ONNX, AI developers can more easily move models between state-of-the-art tools and choose the combination that is best for them. ONNX is developed and supported by a community of partners.