dgkontopoulos / kontopoulos_et_al_temperature_normalisation_2017 Goto Github PK

This repository contains code that reproduces the analyses of the following study:

Dimitrios - Georgios Kontopoulos, Bernardo García-Carreras, Sofía Sal, Thomas P. Smith, and Samraat Pawar: Use and misuse of temperature normalisation in meta-analyses of thermal responses. 2017. [Submitted]

As the scripts are written in Python 2.7.6, Perl 5.18, and R 3.3.1, a number of modules or packages need to be preinstalled.

In particular:

• For Python 2.7.6:
  • bigfloat, version 0.2.1
  • lmfit, version 0.8.1
  • numpy, version 1.9.1
  • scipy, version 0.14.0
• For Perl 5.18:
  • Readonly, version 2.00
  • Statistics::R, version 0.34
  • Text::CSV_XS, version 1.12
• For R 3.3.1:
  • ggalt, version 0.4.0
  • ggplot2, version 2.2.1
  • minpack.lm, version 1.2-1
  • party, version 1.0-18

At the top of each script there is a small description of its purpose and the command that can be used to run it. Some directories (e.g., "Results/"; see each script) need to be manually created for the output files to be generated.