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JHeaps

JHeaps Library

Copyright (C) 2014-2021 Dimitrios Michail

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.


What is this library?

This library contains various heap implementations written in Java.

  • It is easy to use
  • The data structures have a well defined interface
  • It is fast and well documented
  • The heaps are written in a similar way as in the JDK
  • It does not depend on other libraries, so classpathing 'jheaps.jar' is sufficient to use in your project.

What is a heap?

A heap is a priority queue data type which contains elements with keys (duplicate keys are permitted) from a totally-ordered universe. A min-oriented heap supports the following core operations:

  • MAKE-HEAP(): create an empty heap
  • INSERT(H,x): insert an element x into the heap
  • FIND-MIN(H): return an element with the smallest key
  • EXTRACT-MIN(H): remove the element with the smallest key
  • IS-EMPTY(H): is the heap empty?
  • SIZE(H): return the number of elements of the heap
  • CLEAR(H): remove all elements of the heap

A heap does not support a search operation. A special type of heap called explicit or addressable resolves this issue by returning a handle when inserting a new element. This handle can later be used to additionally perform the following operations:

  • DECREASE-KEY(H,x,k): decrease the key of element x to k
  • DELETE(H,x): delete the element x from the heap

Implicit heaps are represented using arrays. They are not addressable as the location of the elements in memory can change. However, they can be made to be addressable by using an additional layer of indirection. In this case we store handles inside the array. Each handle contains an additional integer property, designating the location in the array where the handle is stored.

Some heaps are meldable, that is they efficiently support the union operation:

  • MELD(H1,H2): add all elements of H2 into H1 and destroy H2

As a general rule, heaps using an array representation are not meldable.

Available Heaps

The library contains an extensive collection of heap data structures such as:

  • Tree-based
    • Fibonacci mergeable and addressable heaps
    • Simple Fibonacci heaps
    • Pairing mergeable and addressable heaps
    • Costless-meld variant of Pairing heaps
    • Rank-Pairing (type-1) mergeable and addressable heaps
    • Leftist mergeable and addressable heaps
    • Explicit binary tree addressable heaps
    • Binary tree soft heaps
    • Skew heaps
  • Dag-based
    • Hollow mergeable and addressable heaps
  • Double-ended mergeable and addressable heaps
    • Reflected Fibonacci heaps
    • Reflected Pairing heaps
  • Array-based
    • Binary heaps
    • Binary addressable heaps
    • D-ary heaps
    • D-ary addressable heaps
    • Binary weak heaps
    • Binary weak heaps supporting bulk insertion
    • Highly optimized binary heaps for integer keys using the Wegener bottom-up heuristic and sentinel values
  • Double-ended array-based
    • Binary MinMax heaps
  • Monotone heaps
    • Addressable radix heaps with double, long, int or BigInteger keys
    • Non-addressable radix heaps with double, long, int or BigInteger keys

Compatibility

The library requires JDK v1.8 and above.

Python Bindings

We also provide Python bindings which compile the Java library into a native shared library using GraalVM. The result is a native self-contained library with no dependency on the JVM! For more information see the following links:

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jheaps's Issues

Add info about which signing keys will be used for published artifacts.

Add info about which signing keys will be used for published artifacts.

For security purposes, it would be great if you were able to publish details (in the project docs) about gpg public keys that are "valid" for use when verifying signing artifacts uploaded to maven central.

This allows for "out of band" verification of the expected signing key.

Some examples of other libs publishing their signing keys:

https://square.github.io/okhttp/security/security/#verifying-artifacts

https://github.com/eclipse/jetty.project/blob/jetty-10.0.x/KEYS.txt
https://downloads.apache.org/commons/KEYS
https://downloads.apache.org/logging/KEYS

Static analysis showing null pointers being dereferenced

Sonarqube 7.8 community shows some issues, in particular possible null pointers being dereferenced. Example in
src/main/java/org/jheaps/tree/BinaryTreeSoftAddressableHeap.java.

Line 810 implies that 'cur1' can be null. In Line 772 'cur1' is dereferenced. Same happens with 'cur2'. Also in src/main/java/org/jheaps/tree/BinaryTreeSoftHeap.java.

Is this expected or false positive?

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