Colin Gillespie's Projects
GitHub Actions for the R community
RStudio addin management made easy
Digital Ocean R client
Crowd sourced benchmarking
R package containing data from past benchmarks
This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioConductor: a case study using yeast2 Affymetrix arrays BMC Research Notes, 3:81.
Repository with sample code and instructions for "Continuous Intelligence" and "Continuous Delivery for Machine Learning: CD4ML" workshops
An R package for interacting with the RStudio Connect Server API
Content Security Policies for Shiny Apps
Correlated pseudo-marginal schemes for time-discretised stochastic kinetic models
CSS minifier with structural optimizations
My dotfiles
Drat R Archive Template
The associated R package for Efficient R programming
Efficient R programming: a book
Collection of publicly available libraries
Code for Efficient construction of Bayes optimal designs for stochastic process models.
My github actions playground. Will be deleted
A collection of useful .gitignore templates
This repository contains the knitr/latex source, graphics and R code used in book chapter in Cockell, S, Bashton, M, Gillespie, CS. Bioconductor tools for microarray data analysis. In: Microarray Image and Data Analysis: Theory and Practice. CRC Press.
The latex and R code used the in stochastic simulation book chapter in "In silico Systems Biology: A systems-based approach to understanding biological processes".
R package MatchIt