csgillespie Goto Github PK

abcpmcmc

actions

GitHub Actions for the R community

addinmanager

RStudio addin management made easy

analogsea

Digital Ocean R client

benchmarkme

Crowd sourced benchmarking

benchmarkme-data

R package containing data from past benchmarks

bmc-microarray

This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioConductor: a case study using yeast2 Affymetrix arrays BMC Research Notes, 3:81.

cd4ml-scenarios

Repository with sample code and instructions for "Continuous Intelligence" and "Continuous Delivery for Machine Learning: CD4ML" workshops

connectapi

An R package for interacting with the RStudio Connect Server API

contentsecuritypolicy

Content Security Policies for Shiny Apps

cor-pseudo-marginal

Correlated pseudo-marginal schemes for time-discretised stochastic kinetic models

csgillespie.github.io

csso

CSS minifier with structural optimizations

diagnostics

dotfiles

My dotfiles

drat

Drat R Archive Template

drattravis

efficient

The associated R package for Efficient R programming

efficientr

Efficient R programming: a book

excalidraw-libraries

Collection of publicly available libraries

expt_design

Code for Efficient construction of Bayes optimal designs for stochastic process models.

ga-testing

githubactions

My github actions playground. Will be deleted

gitignore

A collection of useful .gitignore templates

hello-world-docker-action

heroku-test

hybrid-pmcmc

illumina-analysis

This repository contains the knitr/latex source, graphics and R code used in book chapter in Cockell, S, Bashton, M, Gillespie, CS. Bioconductor tools for microarray data analysis. In: Microarray Image and Data Analysis: Theory and Practice. CRC Press.

in-silico-systems-biology

The latex and R code used the in stochastic simulation book chapter in "In silico Systems Biology: A systems-based approach to understanding biological processes".

matchit

R package MatchIt