Bundle ID change invalidates Apple's own compatibility fixes about retroactive HOT 1 OPEN

You raised a good point.

Unfortunately, there's no good way to override the bundle identifier check without requiring users to disable System Integrity Protection. There are a few options without requiring that, though.

The easiest one is to wrap the entire Aperture app with its original bundle identifier intact under a loader .app bundle. The loader app executable can be a shebang script that launches Aperture's main executable.

In fact, this is what Retroactive does for iTunes right now. The disadvantage is that file association becomes messier, and accessing removable volumes such as SD cards may require users to manually drag /bin/bash into Full Disk Access.

from retroactive.