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cwb-feedstock's Introduction

About cwb-feedstock

Feedstock license: BSD-3-Clause

Home: https://gitlab.com/gwburst/public/library

Package license: GPL-3.0-or-later

Summary: cWB pipeline library

Coherent network analysis is addressing the problem of detection and reconstruction of gravitational waves (GW) with networks of detectors. It has been extensively studied in the literature in application to detection of bursts signals, which may be produced by numerous gravitational wave sources in the Universe. In coherent methods, a statistic is built up as a coherent sum over detector responses. In general, it is expected to be more optimal (better sensitivity at the same false alarm rate) than the detection statistics of the individual detectors that make up the network. Also coherent methods provide estimators for the GW waveforms and the source coordinates in the sky.

The method we present (called coherent WaveBurst) is significantly different from the traditional burst detection methods. Unlike coincident methods, which first identify events in individual detectors by using an excess power statistic and than require coincidence between detectors, the coherent WaveBurst method combines all data streams into one coherent statistic constructed in the framework of the constrained maximum likelihood analysis. Such an approach has significant advantages over the coincident methods. First, the sensitivity of the method is not limited by the least sensitive detector in the network. In the coherent WaveBurst method the detection is based on the maximum likelihood ratio statistic which represents the total signal-to-noise ratio of the GW signal detected in the network. Second, other coherent statistics, such as the null stream and the network correlation coefficient can be constructed to distinguish genuine GW signals from the environmental and instrumental artifacts. Finally, the source coordinates of the GW waveforms can be reconstructed.

Current build status

Azure
VariantStatus
linux_64_root_base6.28.12 variant
linux_64_root_base6.30.4 variant

Current release info

Name Downloads Version Platforms
Conda Recipe Conda Downloads Conda Version Conda Platforms

Installing cwb

Installing cwb from the conda-forge channel can be achieved by adding conda-forge to your channels with:

conda config --add channels conda-forge
conda config --set channel_priority strict

Once the conda-forge channel has been enabled, cwb can be installed with conda:

conda install cwb

or with mamba:

mamba install cwb

It is possible to list all of the versions of cwb available on your platform with conda:

conda search cwb --channel conda-forge

or with mamba:

mamba search cwb --channel conda-forge

Alternatively, mamba repoquery may provide more information:

# Search all versions available on your platform:
mamba repoquery search cwb --channel conda-forge

# List packages depending on `cwb`:
mamba repoquery whoneeds cwb --channel conda-forge

# List dependencies of `cwb`:
mamba repoquery depends cwb --channel conda-forge

About conda-forge

Powered by NumFOCUS

conda-forge is a community-led conda channel of installable packages. In order to provide high-quality builds, the process has been automated into the conda-forge GitHub organization. The conda-forge organization contains one repository for each of the installable packages. Such a repository is known as a feedstock.

A feedstock is made up of a conda recipe (the instructions on what and how to build the package) and the necessary configurations for automatic building using freely available continuous integration services. Thanks to the awesome service provided by Azure, GitHub, CircleCI, AppVeyor, Drone, and TravisCI it is possible to build and upload installable packages to the conda-forge anaconda.org channel for Linux, Windows and OSX respectively.

To manage the continuous integration and simplify feedstock maintenance conda-smithy has been developed. Using the conda-forge.yml within this repository, it is possible to re-render all of this feedstock's supporting files (e.g. the CI configuration files) with conda smithy rerender.

For more information please check the conda-forge documentation.

Terminology

feedstock - the conda recipe (raw material), supporting scripts and CI configuration.

conda-smithy - the tool which helps orchestrate the feedstock. Its primary use is in the construction of the CI .yml files and simplify the management of many feedstocks.

conda-forge - the place where the feedstock and smithy live and work to produce the finished article (built conda distributions)

Updating cwb-feedstock

If you would like to improve the cwb recipe or build a new package version, please fork this repository and submit a PR. Upon submission, your changes will be run on the appropriate platforms to give the reviewer an opportunity to confirm that the changes result in a successful build. Once merged, the recipe will be re-built and uploaded automatically to the conda-forge channel, whereupon the built conda packages will be available for everybody to install and use from the conda-forge channel. Note that all branches in the conda-forge/cwb-feedstock are immediately built and any created packages are uploaded, so PRs should be based on branches in forks and branches in the main repository should only be used to build distinct package versions.

In order to produce a uniquely identifiable distribution:

  • If the version of a package is not being increased, please add or increase the build/number.
  • If the version of a package is being increased, please remember to return the build/number back to 0.

Feedstock Maintainers

cwb-feedstock's People

Contributors

ceccozzi avatar chrisburr avatar conda-forge-admin avatar conda-forge-curator[bot] avatar conda-forge-webservices[bot] avatar duncanmmacleod avatar regro-cf-autotick-bot avatar rhyspoulton avatar

Stargazers

 avatar  avatar

Watchers

 avatar  avatar  avatar  avatar  avatar  avatar  avatar

cwb-feedstock's Issues

cwb conda package includes Python libraries for specific Python version

Solution to issue cannot be found in the documentation.

  • I checked the documentation.

Issue

The cwb conda package is installing Python libraries for Python 3.11 in an environment that includes a different python version:

$ mamba create -q -y --prefix ./test python=3.10 cwb
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working...

done
$ ls -1ld ./test/lib/python3*
lrwxrwxrwx  1 duncan duncan    10 Jun  8 22:01 ./test/lib/python3.1 -> python3.10
drwxr-xr-x 36 duncan duncan 12288 Jun  8 22:01 ./test/lib/python3.10
drwxr-xr-x  3 duncan duncan  4096 Jun  8 22:01 ./test/lib/python3.11
$ find ./test/lib/python3.11
./test/lib/python3.11
./test/lib/python3.11/site-packages
./test/lib/python3.11/site-packages/cwb_online--py3.11.egg-info
./test/lib/python3.11/site-packages/cwb_online--py3.11.egg-info/requires.txt
./test/lib/python3.11/site-packages/cwb_online--py3.11.egg-info/PKG-INFO
./test/lib/python3.11/site-packages/cwb_online
./test/lib/python3.11/site-packages/cwb_online/run_utils.py
./test/lib/python3.11/site-packages/cwb_online/xgbonline.py
./test/lib/python3.11/site-packages/cwb_online/pastro_calculation.py
./test/lib/python3.11/site-packages/cwb_online/__pycache__
./test/lib/python3.11/site-packages/cwb_online/__pycache__/__init__.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/root_python.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/run.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/run_ts.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/findtrigger.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/detector.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/pastro_fgmc_laguerre.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/summary_page.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/web_pages.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/xgbonline.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/draw_bkg.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/pastro_calculation.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/frame.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/directory.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/run_calendar.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/Trigger.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/cwb_online.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/check_restart.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/run_utils.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/__pycache__/checkstatus.cpython-311.pyc
./test/lib/python3.11/site-packages/cwb_online/directory.py
./test/lib/python3.11/site-packages/cwb_online/run_ts.py
./test/lib/python3.11/site-packages/cwb_online/check_restart.py
./test/lib/python3.11/site-packages/cwb_online/findtrigger.py
./test/lib/python3.11/site-packages/cwb_online/detector.py
./test/lib/python3.11/site-packages/cwb_online/draw_bkg.py
./test/lib/python3.11/site-packages/cwb_online/summary_page.py
./test/lib/python3.11/site-packages/cwb_online/run_calendar.py
./test/lib/python3.11/site-packages/cwb_online/run.py
./test/lib/python3.11/site-packages/cwb_online/Trigger.py
./test/lib/python3.11/site-packages/cwb_online/frame.py
./test/lib/python3.11/site-packages/cwb_online/cwb_online.py
./test/lib/python3.11/site-packages/cwb_online/pastro_fgmc_laguerre.py
./test/lib/python3.11/site-packages/cwb_online/__init__.py
./test/lib/python3.11/site-packages/cwb_online/root_python.py
./test/lib/python3.11/site-packages/cwb_online/web_pages.py
./test/lib/python3.11/site-packages/cwb_online/checkstatus.py

If this package is going to ship Python libraries, it needs to be built for each supported Python version.

Installed packages

# packages in environment at /home/duncan/git/cwb-library/test:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
_sysroot_linux-64_curr_repodata_hack 3                   h69a702a_13    conda-forge
afterimage                1.21              ha9998ff_1003    conda-forge
atk-1.0                   2.38.0               hd4edc92_1    conda-forge
binutils_impl_linux-64    2.39                 he00db2b_1    conda-forge
binutils_linux-64         2.39                h5fc0e48_13    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.19.1               hd590300_0    conda-forge
ca-certificates           2023.5.7             hbcca054_0    conda-forge
cairo                     1.16.0            ha61ee94_1014    conda-forge
cffi                      1.15.1          py310h255011f_3    conda-forge
cfitsio                   4.2.0                hd9d235c_0    conda-forge
cwb                       6.4.3.4              ha62ad56_0    conda-forge
davix                     0.8.4                hafe4d26_1    conda-forge
expat                     2.5.0                hcb278e6_1    conda-forge
fftw                      3.3.10          nompi_hc118613_107    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.2               h14ed4e7_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
freetype                  2.12.1               hca18f0e_1    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
ftgl                      2.4.0                hbcb1f35_0    conda-forge
gcc_impl_linux-64         11.3.0              hab1b70f_19    conda-forge
gcc_linux-64              11.3.0              he6f903b_13    conda-forge
gdk-pixbuf                2.42.8               hff1cb4f_1    conda-forge
gettext                   0.21.1               h27087fc_0    conda-forge
giflib                    5.2.1                h0b41bf4_3    conda-forge
gl2ps                     1.4.2                h0708190_0    conda-forge
glew                      2.1.0                h9c3ff4c_2    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  6.0.2                h99bc08f_0    conda-forge
gsl                       2.7                  he838d99_0    conda-forge
gsoap                     2.8.123              h8dc497d_0    conda-forge
gtk2                      2.24.33              h90689f9_2    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
gxx_impl_linux-64         11.3.0              hab1b70f_19    conda-forge
gxx_linux-64              11.3.0              hc203a17_13    conda-forge
harfbuzz                  6.0.0                h8e241bc_0    conda-forge
hdf5                      1.14.0          nompi_hb72d44e_103    conda-forge
healpix_cxx               3.81                 h6f8cf2a_1    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
jpeg                      9e                   h0b41bf4_3    conda-forge
kernel-headers_linux-64   3.10.0              h4a8ded7_13    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.20.1               h81ceb04_0    conda-forge
lalsimulation-data        5.2.0                ha770c72_1    conda-forge
ld_impl_linux-64          2.39                 hcc3a1bd_1    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libaec                    1.0.6                hcb278e6_1    conda-forge
libblas                   3.9.0           17_linux64_openblas    conda-forge
libcblas                  3.9.0           17_linux64_openblas    conda-forge
libcurl                   8.1.2                h409715c_0    conda-forge
libcxx                    15.0.7               hf52228f_0    conda-forge
libcxxabi                 15.0.7               ha770c72_0    conda-forge
libdeflate                1.14                 h166bdaf_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libexpat                  2.5.0                hcb278e6_1    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libframel                 8.42.2               h166bdaf_1    conda-forge
libgcc-devel_linux-64     11.3.0              h210ce93_19    conda-forge
libgcc-ng                 13.1.0               he5830b7_0    conda-forge
libgd                     2.3.3                h18fbbfe_3    conda-forge
libgfortran-ng            13.1.0               h69a702a_0    conda-forge
libgfortran5              13.1.0               h15d22d2_0    conda-forge
libglib                   2.76.3               hebfc3b9_0    conda-forge
libglu                    9.0.0             he1b5a44_1001    conda-forge
libgomp                   13.1.0               he5830b7_0    conda-forge
libhwloc                  2.9.1                hd6dc26d_0    conda-forge
libiconv                  1.17                 h166bdaf_0    conda-forge
liblal                    7.3.1           fftw_h88093d1_100    conda-forge
liblalburst               2.0.1                hc5c143e_0    conda-forge
liblalmetaio              4.0.1                h0b41bf4_0    conda-forge
liblalsimulation          5.2.0           py310h63a0205_1    conda-forge
liblapack                 3.9.0           17_linux64_openblas    conda-forge
libllvm13                 13.0.1               hf817b99_2    conda-forge
libmetaio                 8.5.1             h753d276_1002    conda-forge
libnghttp2                1.52.0               h61bc06f_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libopenblas               0.3.23          pthreads_h80387f5_0    conda-forge
libpng                    1.6.39               h753d276_0    conda-forge
librsvg                   2.54.4               h7abd40a_0    conda-forge
libsanitizer              11.3.0              h239ccf8_19    conda-forge
libsqlite                 3.42.0               h2797004_0    conda-forge
libssh2                   1.11.0               h0841786_0    conda-forge
libstdcxx-devel_linux-64  11.3.0              h210ce93_19    conda-forge
libstdcxx-ng              13.1.0               hfd8a6a1_0    conda-forge
libtiff                   4.4.0                h82bc61c_5    conda-forge
libtool                   2.4.7                h27087fc_0    conda-forge
libuuid                   2.38.1               h0b41bf4_0    conda-forge
libwebp                   1.2.4                h522a892_0    conda-forge
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxml2                   2.10.3               hca2bb57_4    conda-forge
libzlib                   1.2.13               h166bdaf_4    conda-forge
lz4-c                     1.9.4                hcb278e6_0    conda-forge
ncurses                   6.4                  hcb278e6_0    conda-forge
nlohmann_json             3.11.2               h27087fc_0    conda-forge
numpy                     1.24.3          py310ha4c1d20_0    conda-forge
openssl                   3.1.1                hd590300_1    conda-forge
pango                     1.50.14              hd33c08f_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pcre2                     10.40                hc3806b6_0    conda-forge
pip                       23.1.2             pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               h36c2ea0_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pythia8                   8.307           py310hd8f1fbe_0    conda-forge
python                    3.10.11         he550d4f_0_cpython    conda-forge
python_abi                3.10                    3_cp310    conda-forge
readline                  8.2                  h8228510_1    conda-forge
root_base                 6.28.0          py310h720e498_1    conda-forge
scitokens-cpp             0.7.1                hf3971a6_0    conda-forge
setuptools                67.7.2             pyhd8ed1ab_0    conda-forge
sqlite                    3.42.0               h2c6b66d_0    conda-forge
sysroot_linux-64          2.17                h4a8ded7_13    conda-forge
tbb                       2021.9.0             hf52228f_0    conda-forge
tcsh                      6.24.10              h8228510_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
tzdata                    2023c                h71feb2d_0    conda-forge
vdt                       0.4.3                h9c3ff4c_0    conda-forge
vector-classes            1.4.3                h924138e_0    conda-forge
wheel                     0.40.0             pyhd8ed1ab_0    conda-forge
xorg-fixesproto           5.0               h7f98852_1002    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.0.10               h7f98852_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.6.12               h36c2ea0_0    conda-forge
xorg-libxau               1.0.11               hd590300_0    conda-forge
xorg-libxcursor           1.2.0                h516909a_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h516909a_0    conda-forge
xorg-libxfixes            5.0.3             h516909a_1004    conda-forge
xorg-libxft               2.3.4                hc534e41_1    conda-forge
xorg-libxpm               3.5.13               h516909a_0    conda-forge
xorg-libxrender           0.9.10            h516909a_1002    conda-forge
xorg-libxt                1.1.5             h516909a_1003    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xrootd                    5.5.4           py310h8ff6cd0_0    conda-forge
xxhash                    0.8.1                h0b41bf4_0    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
zlib                      1.2.13               h166bdaf_4    conda-forge
zstd                      1.5.2                h3eb15da_6    conda-forge

Environment info

active environment : None
            shell level : 0
       user config file : /home/duncan/.condarc
 populated config files : /home/duncan/opt/mambaforge/.condarc
                          /home/duncan/.condarc
          conda version : 23.1.0
    conda-build version : 3.24.0
         python version : 3.10.10.final.0
       virtual packages : __archspec=1=x86_64
                          __glibc=2.31=0
                          __linux=5.15.90.1=0
                          __unix=0=0
       base environment : /home/duncan/opt/mambaforge  (writable)
      conda av data dir : /home/duncan/opt/mambaforge/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/igwn/linux-64
                          https://conda.anaconda.org/igwn/noarch
          package cache : /home/duncan/opt/mambaforge/pkgs
                          /home/duncan/.conda/pkgs
       envs directories : /home/duncan/opt/mambaforge/envs
                          /home/duncan/.conda/envs
               platform : linux-64
             user-agent : conda/23.1.0 requests/2.28.2 CPython/3.10.10 Linux/5.15.90.1-microsoft-standard-WSL2 debian/11 glibc/2.31
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False

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