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iannotatesv

iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Generation DNA sequencing data.

in_silico_pcr

Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.

jbrowse

A modern genome browser built with JavaScript and HTML5.

learning_go

liteide

LiteIDE is a simple, open source, cross-platform Go IDE.

machine-learning

my machine-learning tutorial

merrimanlab.github.io

Lab website

miniontoolkit

mongolearning

mongodb learning

moss

An open-source tool-augmented conversational language model from Fudan University

multi-metagenome

Scripts and tutorials on how to assemble individual microbial genomes from metagenomes

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

mykrobe

Antibiotic resistance prediction in minutes

oncokb

oncoKB api

oncokb-annotator

Annotates variants in MAF with OncoKB annotation.

parasail

Pairwise Sequence Alignment Library

picky

Structural Variants Pipeline for Long Reads

pip

pipline_module

pipline

pipline

poretools

a toolkit for working with Oxford nanopore data

primer_design

primer design

pubmed

bibliography generater

purecn

Copy number calling and variant classification using targeted short read sequencing

pydata-notebook

利用Python进行数据分析 第二版 (2017) 中文翻译笔记

pyentrezid

Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id

pyrailgun

Simple And Easy Python Crawl Framework，支持抓取javascript渲染的页面的简单实用高效的python网页爬虫抓取模块

python-100-days

Python - 100天从新手到大师

qc_report

qqsub

qsub