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fourspheremodel

Four sphere head model for computations of EEG potentials

freesurfer

Stripped sources of Freesurfer + Debian packaging -- volatile, might be rewritten without notice

fruekilde_oct_stall_quant_paper

Fruekilde et al. (in prepration)

gridmap

Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

hnn

The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.

hnn-core

Simulation and optimization of neural circuits for MEG/EEG source estimates

hnn-core-examples

icsd

Python-implementation of the inverse current source density (iCSD) methods from http://software.incf.org/software/csdplotter

installation_notes

various memes for installing software

ipython-hierarchymagic

`%hierarchy` and `%%dot` magics for IPython

iso2mesh

iso2mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave

janus3d_toolbox

jupyter-themes

Custom Jupyter Notebook Themes

kingjr_natmeg_arhus

copy of JR King's Matlab code

lfpsim

Simulation scripts to compute Local Field Potentials (LFP) of cable compartmental models implemented with NEURON

lfpy

Python-module for calculation of extracellular potentials from multicompartment neuron models and networks

mea-tools

Tools for viewing, analyzing, and processing multi-electrode array data.

meeg_training

Training resources for MEG/EEG

meegpipe

Main meegpipe repository

memory_profiling

mindlab_dicomdb_access

Query functions for the MINDLab DICOM database

minihai

An open-source application for running notebooks server-side

mlep-public

Public repo for DeepLearning.AI MLEP Specialization

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

mne-sandbox

experimental mne-python code

mnelab

MNELAB - a graphical user interface (GUI) for MNE

modern-unix

A collection of modern/faster/saner alternatives to common unix commands.

nbt

The Neurophysiological Biomarker Toolbox

netpyne

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.