brews / baysplinepy Goto Github PK

Need to write a unit test that checks our spline against the original MATLAB original.

Be sure we test the extrapolation beyond 0-35 range.

Want agreement to 3 decimal places.

site-packages/bayspline/utils.py:101: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use arr[tuple(seq)] instead of arr[seq]. In the future this will be interpreted as an array index, arr[np.array(seq)], which will result either in an error or a different result.
x = addknots - b[[jl]]

and

site-packages/bayspline/utils.py:102: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use arr[tuple(seq)] instead of arr[seq]. In the future this will be interpreted as an array index, arr[np.array(seq)], which will result either in an error or a different result.
a = c[[jl]]

README needs to be put as long_description in setup.py.

There has been an update upstream. Need to bring that change in. Something about how we're calculating the prior mean.

Need documentation

In predict_sst() the pstd argument needs to be refactored to prior_std to be consistent with our sister prediction function in baysparpy.

Right now our OSX travis-ci script is failing with error:

�[31mError:�[0m python 2.7.14 is already installed

To upgrade to 3.6.4_4, run `brew upgrade python`



travis_time:end:0c1bde36:start=1521948758860865000,finish=1521948840559109000,duration=81698244000
�[0K

�[31;1mThe command "if [[ "$JOB_OS" == "MacOSX" ]]; then brew update; brew install python3; fi" failed and exited with 1 during .�[0m



Your build has been stopped.

/Users/travis/.travis/job_stages: line 166: shell_session_update: command not found

I think this has something to do with homebrew now using python3 by default...