Network analysis of marmoset connectivity data. Contains matlab files and .csv data files for analysis of marmoset cortex connectivity data from marmoset brain.org.

Publication #1 is: Bernard A Pailthorpe. Network analysis of Marmoset cortical connections reveals pFC and sensory clusters. preprint at bioRxiv (Feb 2024).

Codes: MarmosetReadDataV1.m, (read in basic data) MarmosetTestCalcV3.m, (basic calc & plots) MarmosetTemporalNetV2.m (3D vis, link tracing)

Data files: AdjMarmoset.csv, AdjFullMarmoset.csv, AdjMarmoset_Rescale2b.csv, MarmosetAcrn116.csv, MarmosetAcrn139to116.csv, CoordsMarmoset.csv, MarmosetLobes116.csv, VolsMarmoset.csv, MarmosetPairListRescale2b.clu, MarmosetGrayImageSlice.csv

Publication #2: Bernard A Pailthorpe. “Simulated dynamical transitions in a heterogeneous 1 Marmoset pFC cluster”. Submitted to Front. Comp. Neurosci. (Mar 2024).

Codes: MarmosetReadDataV1, fourNMfreqV5b.m, sixNMclusterV4b.m, sixNMclusterV5d.m, sixNMfreqV5b.m, WaveTrains.m; JR12a.m, R12v5b.m, R12v5d.m. Data: one file, AdjMarmoset_Rescale2b.csv, from above list.