blackrim / opentree_pytoys Goto Github PK

Hi,

I'm quite sure that this script doesn't work properly. The resultant tree gives error every time when opening it

with newickutils : ERROR: missing ')' at line 0 near '('.

with figtree : Erroe reading tree file: Missing closing ")" in the tree

However, wired enough that:

1. pxcltr doesn't work with resultant tree (/apps/phyx/0.99/launch_phyx: line 12: 15013 Segmentation fault singularity exec ${HPC_SINGULARITY_IMG}/phyx/0.99-xenial.img "$@")
2. while Dendroscope accept it ;)

I think we still need a normal newick formmat.

Miao

Here is the cmd and tree (sorry for the long file)
python ./opentree_pytoys/src/convert_ottids_names_tre.py Changbai_ottid.tre Changbai_ottree_node_tip_ottids >test.tre

Changbai_ottid.tre:
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Changbai_ottree_node_tip_ottids:
10210 Tracheophyta
1007992 Euphyllophyta
10218 Spermatophyta
99252 Magnoliophyta
5298374 Mesangiospermae
431495 eudicotyledons
853757 Gunneridae
5316182 Pentapetalae
431493 Oxalidales
372826 Oxalidaceae
372830 Oxalis
323425 Oxalis acetosella
323420 Oxalis acetosella subsp. japonica
429482 Malpighiales
914245 Euphorbiaceae
719243 Euphorbioideae
520955 Euphorbieae
864036 Euphorbia
1076556 Euphorbia humifusa
5147160 Euphorbia sect. Esula
253558 Euphorbia sieboldiana
864028 Euphorbia esula
264674 Euphorbia hylonoma
591092 Euphorbia lucorum
1094341 Acalypheae
560972 Acalypha
607870 Acalypha australis
1000257 Linaceae
393350 Linum stelleroides
62390 Phyllanthaceae
176067 Bridelieae
5763486 Securineginae
365947 Securinega
571181 Securinega suffruticosa
873015 Hypericaceae
1001315 Hypericeae
974217 Hypericum
215651 Hypericum ascyron
304188 Hypericum ascyron var. longistylum
304184 Hypericum attenuatum
952753 Hypericum fauriei
530183 Salicaceae
509390 Saliceae
530178 Populus
148793 Populus koreana
164196 Populus maximowiczii
620851 Populus ussuriensis
819942 Populus davidiana
980993 Populus simonii
458856 Salix (genus in kingdom Archaeplastida)
112994 Salix subfragilis
148767 Salix rosmarinifolia
171988 Salix nummularia
202569 Salix siuzevii
232339 Salix rorida
265785 Salix kangensis
309527 Salix taraikensis
458851 Salix viminalis
459841 Salix arbutifolia
474367 Salix gracilistyla
531931 Salix raddeana
694851 Salix myrtilloides
725919 Salix polyadenia
738770 Salix integra
738780 Salix pentandra
895184 Salix triandra
895186 Salix schwerinii
895197 Salix purpurea
3915133 Chosenia maximowiczii
334625 Salix rotundifolia
5763556 Salix starkeana
5763585 Salix xerophila
95448 Salix matsudana
6105298 Salix yanbianica
224730 Violaceae
295597 Viola (genus in kingdom Archaeplastida)
108248 Viola mandshurica
131176 Viola sacchalinensis
131196 Viola verecunda
382884 Viola selkirkii
870070 Viola yezoensis
436216 Viola biflora
478043 Viola dissecta
643801 Viola dactyloides
746275 Viola epipsila
705822 Viola websteri
741833 Viola mirabilis
753841 Viola collina
959069 Viola rossii
959071 Viola diamantiaca
959080 Viola phalacrocarpa
959086 Viola patrinii
1009601 Viola acuminata
3915383 Viola muehldorfii
478041 Viola variegata
841511 Celastrales
601168 Celastraceae
1035579 Parnassia
1039565 Parnassia palustris
601155 Euonymus
70536 Euonymus verrucosus
601141 Euonymus alatus
1062527 Euonymus maackii
56759 Celastrus
56757 Celastrus orbiculatus
709260 Celastrus flagellaris
483026 Tripterygium
300831 Tripterygium wilfordii
208031 Rosales
658494 Urticaceae
594987 Boehmeria
333302 Boehmeria tricuspis
267703 Urtica (genus in kingdom Archaeplastida)
4729822 Urtica laetevirens
5264237 Urtica angustifolia
1091013 Pilea
691474 Pilea japonica
1091023 Pilea pumila
348789 Laportea
4729826 Laportea bulbifera
630640 Parietaria (genus in kingdom Archaeplastida)
5264256 Parietaria micrantha
672404 Girardinia
736192 Girardinia diversifolia
83996 Cannabaceae
84015 Humulus
74299 Humulus scandens
1014672 Ulmaceae
94969 Ulmus (genus in kingdom Archaeplastida)
572885 Ulmus macrocarpa
1011369 Ulmus laciniata
1011372 Ulmus pumila
4729838 Ulmus davidiana
5763065 Ulmus davidiana var. japonica
582841 Hemiptelea
582829 Hemiptelea davidii
329916 Rhamnaceae
784654 Rhamneae
329914 Rhamnus
228771 Rhamnus davurica
5264448 Rhamnus parvifolia
5763213 Rhamnus koraiensis
5763214 Rhamnus ussuriensis
6109462 Rhamnus diamantiaca
208036 Rosaceae
731147 Rosoideae
891493 Sanguisorbeae
116305 Sanguisorbinae
902629 Sanguisorba
109151 Sanguisorba sitchensis
872135 Sanguisorba tenuifolia
872142 Sanguisorba obtusa
902644 Sanguisorba parviflora
964939 Sanguisorba officinalis
842795 Agrimoniinae
435258 Agrimonia
383278 Agrimonia pilosa
573571 Agrimonia coreana
891491 Potentilleae
827034 Potentilleae unplaced
187939 Potentilla
396153 Potentilla supina
70273 Potentilla supina subsp. paradoxa
307088 Potentilla parvifolia
336103 Potentilla freyniana
475287 Potentilla discolor
538520 Potentilla centigrana
809911 Potentilla longifolia
880112 Potentilla tanacetifolia
902641 Potentilla fragarioides
3904890 Potentilla cryptotaeniae
493031 Potentilla chinensis
493033 Potentilla multifida
713702 Duchesnea
677350 Duchesnea chrysantha
827033 Fragariinae
922848 Dasiphora
782136 Dasiphora fruticosa
559839 Comarum
902637 Comarum palustre
176704 Sibbaldia
176706 Sibbaldia procumbens
208027 Fragaria
1004806 Fragaria orientalis
259066 Rosa
868179 Rosa acicularis
756352 Rosa koreana
868183 Rosa maximowicziana
366725 Colurieae
259063 Geum
77545 Geum aleppicum
972648 Rubus
149341 Rubus pungens
148062 Rubus crataegifolius
412766 Rubus sachalinensis
993560 Rubus arcticus
902631 Rubus chamaemorus
503376 Filipendula
3905512 Filipendula palmata
3905516 Filipendula angustiloba
3905517 Filipendula glaberrima
3905520 Filipendula intermedia
731134 Maloideae
901808 Maleae
489718 Sorbus
317916 Sorbus pohuashanensis
366123 Sorbus alnifolia
208026 Malus
371175 Malus baccata
3902998 Malus komarovii
896383 Malus mandshurica
259068 Pyrus
116277 Pyrus ussuriensis
842028 Crataegus
798280 Crataegus pinnatifida
582036 Crataegus dahurica
582049 Crataegus maximowiczii
376844 Spiraeeae
802382 Aruncus
207990 Aruncus dioicus
489730 Spiraea
437899 Spiraea salicifolia
508587 Spiraea media
882957 Spiraea trichocarpa
3902559 Spiraea dahurica
5527754 Spiraea sericea
376840 Sorbarieae
489722 Sorbaria
873712 Sorbaria sorbifolia
901806 Osmaronieae
7764 Exochorda
717971 Exochorda serratifolia
187946 Prinsepia
769163 Prinsepia sinensis
376842 Amygdaleae
731578 Prunus
42872 Prunus maximowiczii
190311 Prunus salicina
870892 Prunus maackii
3902712 Prunus sachalinensis
376838 Neillieae
738641 Physocarpus
424282 Physocarpus amurensis
366727 Dryadoideae
644048 Dryas (genus in kingdom Archaeplastida)
176708 Dryas octopetala
5336417 Dryas octopetala var. asiatica
11011 Cucurbitales
1006267 Cucurbitaceae
651809 Thladiantheae
841354 Thladiantha
841348 Thladiantha dubia
267709 Fagales
791138 Betulaceae
267715 Betula
731671 Betula platyphylla
46585 Betula schmidtii
495502 Betula davurica
495506 Betula costata
567485 Betula fruticosa
667695 Betula ovalifolia
567488 Betula ermanii
791135 Alnus
639105 Alnus japonica
639096 Alnus hirsuta
1071678 Alnus mandshurica
424333 Corylus
214011 Corylus mandshurica
550611 Corylus heterophylla
619397 Carpinus
799877 Carpinus cordata
438186 Juglandaceae
1072884 Juglans
70093 Juglans mandshurica
267713 Fagaceae
791121 Quercus
429749 Quercus dentata
926284 Quercus wutaishanica
956360 Fabales
560323 Fabaceae
39538 Papilionoideae
563853 Hedysareae
809994 Hedysarum
5532078 Hedysarum ussuriense
440907 Astragalus stevenianus
263091 Astragalus membranaceus
396758 Oxytropis
99396 Oxytropis anertii
63935 Astragalus melilotoides
99398 Astragalus uliginosus
935477 Trifolium
116218 Trifolium repens
839027 Trifolium pratense
1066885 Trifolium lupinaster
1039844 Fabeae
935306 Vicia venosa
136993 Vicia amurensis
539541 Vicia cracca
863684 Vicia pseudo-orobus
863679 Vicia unijuga
942342 Vicia ramuliflora
3928921 Vicia ohwiana
238361 Vicia amoena
1036594 Lathyrus
177905 Lathyrus humilis
177910 Lathyrus komarovii
308795 Lathyrus vaniotii
701246 Lathyrus davidii
883434 Lathyrus palustris
883454 Lathyrus quinquenervius
1018594 Lathyrus pratensis
1036603 Lathyrus odoratus
306104 Melilotus
38042 Melilotus albus
38048 Melilotus officinalis
989938 Melilotus officinalis subsp. suaveolens
459704 Glycine
5533150 Soja
459708 Glycine soja
1063930 Amphicarpaea
213839 Amphicarpaea trisperma
1090339 Desmodieae
1044286 Hylodesmum
383458 Hylodesmum podocarpum
766997 Hylodesmum podocarpum subsp. oxyphyllum
653601 Lespedeza
144305 Lespedeza bicolor
599853 Lespedeza juncea
1044754 Lespedeza davurica
1077029 Lespedeza cyrtobotrya
653608 Kummerowia (genus in kingdom Archaeplastida)
337222 Kummerowia striata
653610 Kummerowia stipulacea
434092 Campylotropis
394356 Campylotropis macrocarpa
49912 Maackia (genus in kingdom Archaeplastida)
49914 Maackia amurensis
711191 Sophora flavescens
404633 Senna
55890 Senna nomame
299382 Polygalaceae
179376 Polygala tatarinowii
378129 Polygala tenuifolia
853283 Polygala sibirica
8844 Brassicales
309271 Brassicaceae
5232954 Turritideae
836246 Turritis
407496 Turritis glabra
546593 Catolobus
682496 Catolobus pendulus
76683 Erysimeae
1037337 Erysimum
36287 Erysimum cheiranthoides
338446 Lepidieae
637146 Lepidium
226076 Lepidium apetalum
806482 Lepidium densiflorum
560483 Cardamineae
609002 Cardamine
33822 Cardamine changbaiana
131963 Cardamine leucantha
609020 Cardamine pratensis
281002 Cardamine yezoensis
338264 Cardamine trifida
740940 Cardamine parviflora
478843 Cardamine impatiens
706548 Cardamine prorepens
192073 Cardamine scutata
3932710 Cardamine komarovii
3932727 Cardamine lyrata
35918 Barbarea
264958 Barbarea orthoceras
341720 Rorippa
720866 Rorippa globosa
509322 Hesperideae
281543 Hesperis
629475 Hesperis sibirica
918850 Draba nemorosa
550043 Arabis hirsuta
3931318 Arabis coronata
5762943 Arabis nipponica
229284 Malvales
1015625 Thymelaeaceae
549854 Daphne
1028544 Daphne pseudomezereum
44291 Daphne pseudomezereum var. koreana
279960 Malvaceae
469942 Malvoideae
83402 Hibiscus
120915 Hibiscus trionum
930069 Malva
297245 Malva verticillata
121966 Malva sylvestris
996483 Tilioideae
30483 Tilia
790022 Tilia mandshurica
5762463 Tilia amurensis
648900 Geraniales
948914 Geraniaceae
948948 Geranium
157260 Geranium dahuricum
298271 Geranium krameri
381970 Geranium erianthum
387583 Geranium soboliferum
65776 Geranium koreanum
298228 Geranium koraiense
387600 Geranium sibiricum
956523 Geranium wilfordii
5748363 Geranium platyanthum
197828 Erodium
1083503 Erodium stephanianum
648898 Myrtales
1015483 Onagraceae
5740793 Onagroideae
5747166 Circaeeae
240815 Circaea
843597 Circaea alpina
240817 Circaea cordata
368031 Circaea lutetiana
5747164 Onagreae
277109 Oenothera
12659 Oenothera biennis
5747162 Epilobieae
139464 Epilobium
916993 Epilobium amurense
940374 Epilobium palustre
980120 Epilobium parviflorum
181424 Epilobium ciliatum
6123151 Epilobium fastigiatoramosum
6123204 Epilobium minutiflorum
215746 Chamerion
139466 Chamerion angustifolium
5740795 Ludwigioideae
312147 Ludwigia (genus in kingdom Archaeplastida)
5762553 Ludwigia prostrata
489493 Lythraceae
886850 Lythrum
886851 Lythrum salicaria
1069308 Vitales
329895 Vitaceae
329909 Parthenocissus
417328 Parthenocissus tricuspidata
329893 Vitis
805071 Vitis amurensis
337874 Ampelopsis
769625 Ampelopsis glandulosa
582639 Ampelopsis glandulosa var. brevipedunculata
432991 Paeoniaceae
747767 Paeonia
352877 Paeonia lactiflora
163406 Paeonia obovata
509332 Crassulaceae
276318 Hylotelephium verticillatum
799697 Hylotelephium erythrostictum
276312 Hylotelephium pallescens
308121 Hylotelephium spectabile
185026 Phedimus hybridus
308119 Phedimus aizoon
581648 Rhodiola sachalinensis
408085 Haloragaceae
730266 Myriophyllum verticillatum
271918 Astilbe chinensis
1023063 Astilboides
756727 Astilboides tabularis
182589 Micranthes punctata
5729610 Micranthes laciniata
497126 Chrysosplenium
126852 Chrysosplenium pilosum
126848 Chrysosplenium pilosum var. sphaerospermum
1040352 Chrysosplenium ramosum
1040354 Chrysosplenium sinicum
500586 Chrysosplenium alternifolium
1040358 Chrysosplenium flagelliferum
6044300 Chrysosplenium lectus-cochleae
365321 Mitella nuda
756719 Saxifraga cernua
1062960 Astilbe koreana
488526 Grossulariaceae
560321 Ribes
729464 Ribes triste
734523 Ribes diacanthum
747529 Ribes komarovii
154642 Ribes rubrum
769233 Ribes maximowiczianum
769228 Ribes mandshuricum
6043975 Ribes horridum
6044004 Ribes pallidiflorum
6044010 Ribes procumbens
596112 lamiids
23736 Lamiales
5263556 Core_Lamiales
1041309 Plantaginaceae
705594 Plantagineae
609811 Plantago
217282 Plantago asiatica
1004414 Plantago depressa
376074 Plantago lanceolata
1004418 Plantago hostifolia
705593 Veroniceae
507032 Veronica
5522034 Beccabunga
115123 Veronica serpyllifolia
6073236 Pseudolysimachium
79014 Veronica longifolia
5522032 Veronica subgenus Veronica
513859 Veronica stelleri
484335 Veronicastrum
484334 Veronicastrum sibiricum
6073463 Veronicastrum tubiflorum
182045 Callitricheae
1080799 Callitriche
338217 Callitriche palustris
705598 Hippurideae
192291 Hippuris
880703 Hippuris vulgaris
83793 Euphrasia
140737 Euphrasia pectinata
415296 Euphrasia maximowiczii
721193 Phtheirospermum
981070 Phtheirospermum japonicum
989660 Pedicularis
205540 Pedicularis grandiflora
914299 Pedicularis spicata
980478 Pedicularis verticillata
980479 Pedicularis resupinata
6088185 Pedicularis mandshurica
447802 Orobancheae
6087731 Orobanche caerulescens
738841 Phrymaceae
5334418 Erythranthe
75214 Erythranthe microphylla
1087001 Phryma
1087002 Phryma leptostachya
544714 Lamiaceae
394658 Nepetoideae
498490 Mentheae
907454 Thymus (genus in kingdom Archaeplastida)
1058608 Thymus serpyllum
830074 Mentha canadensis
636209 Meehania urticifolia
414313 Agastache
485528 Agastache rugosa
165559 Dracocephalum argunense
314683 Nepeta
491364 Nepeta stewartiana
304968 Lycopus (genus in kingdom Archaeplastida)
980292 Lycopus lucidus
586212 Lycopus lucidus var. maackianus
619550 Lycopus uniflorus
314693 Prunella (genus in kingdom Archaeplastida)
709050 Prunella asiatica
498488 Ocimeae
634137 Isodon (genus in kingdom Archaeplastida)
364890 Isodon serra
27323 Elsholtzieae
490129 Elsholtzia
1067793 Elsholtzia ciliata
1074933 Lamioideae
1010876 Lamieae
332799 Lamium
94411 Lamium barbatum
1010868 Leonureae
116381 Leonurus macranthus
789065 Leonurus sibiricus
534798 Phlomideae
6081393 Phlomoides koraiensis
6081401 Phlomoides maximowiczii
534796 Stachydeae
298389 Stachys baicalensis
5800796 Stachys chinensis
534790 Pogostemoneae
732636 Pogostemon
5921548 Pogostemon yatabeanus
1074931 Scutellarioideae
544701 Scutellaria (genus in kingdom Archaeplastida)
357390 Scutellaria laeteviolacea
795166 Scutellaria baicalensis
5793096 Scutellaria regeliana
5793097 Scutellaria dependens
6085810 Scutellaria tuminensis
1074930 Teucrioideae
736688 Amethystea
736685 Amethystea caerulea
659713 Lentibulariaceae
512422 Utricularia
604700 Utricularia vulgaris
615291 Linderniaceae
414644 Lindernia
135588 Lindernia crustacea
91446 Pedaliaceae
628377 Trapella
477458 Trapella sinensis
981058 Siphonostegia
981056 Siphonostegia chinensis
708506 Didymocarpoideae
649722 Trichosporeae
5522099 Loxocarpinae
5512693 Dorcoceras
1053976 Dorcoceras hygrometricum
23723 Oleaceae
483275 Syringa
11353 Syringa wolfii
129929 Syringa pubescens
129924 Syringa pubescens subsp. microphylla
129925 Syringa pubescens subsp. patula
671810 Fraxinus
846439 Fraxinus chinensis
663317 Fraxinus chinensis subsp. rhynchophylla
5261925 Boraginales
6062534 Cynoglossoideae
832281 Brachybotrys
832279 Brachybotrys paridiformis
82995 Myosotis
760140 Myosotis laxa
6063020 Rochelieae
6063021 Eritrichiinae
114241 Lappula redowskii
5144510 Lappula myosotis
6061933 Boraginoideae
6062009 Lithospermeae
791528 Lithospermum erythrorhizon
1050255 Solanales
494850 Convolvulaceae
830575 Cuscuteae
1071030 Cuscuta
5506194 Grammica
5921719 Cuscuta sect. Grammica
286530 Cuscuta chinensis
5921711 Cuscuta subgenus Cuscuta
773450 Cuscuta europaea
5506171 Monogynella
1097404 Cuscuta japonica
302647 Ipomoeeae
494853 Ipomoea
1071036 Ipomoea purpurea
473827 Solanaceae
925265 Physalis alkekengi
524062 Gentianales
1014022 Rubiaceae
521012 Rubieae
297658 Galium kamtschaticum
414746 Galium trifidum
541023 Galium verum
952328 Galium triflorum
3872740 Galium davuricum
3872880 Galium linearifolium
3872920 Galium bungei
3873102 Galium paradoxum
527413 Galium spurium
5232793 Galium spurium var. echinospermum
322051 Rubia
385526 Rubia cordifolia
3872636 Rubia chinensis
5784241 Rubia sylvatica
524059 Apocynaceae
673329 Asclepiadoideae
673333 Asclepiadeae
5518226 Tylophorinae
514638 Vincetoxicum
204095 Vincetoxicum acuminatum
854749 Vincetoxicum atratum
5518230 Cynanchinae
592207 Metaplexis
592208 Metaplexis japonica
816899 Gentianaceae
707911 Gentianeae
168233 Gentiana
65134 Gentiana zollingeri
116672 Gentiana jamesii
162248 Gentiana manshurica
332800 Gentiana pseudoaquatica
332811 Gentiana squarrosa
717875 Gentiana scabra
449120 Gentiana algida
485204 Gentiana triflora
1011762 Swertia
797040 Swertia chinensis
6069337 Swertia veratroides
862721 Halenia (genus in kingdom Archaeplastida)
335878 Halenia corniculata
596121 campanulids
1042120 Asterales
46248 Asteraceae
578390 Cichorioideae
578387 Cichorieae
644707 Hyoseridinae
761940 Sonchus
572930 Sonchus brachyotus
472091 Crepidinae
436307 Ixeris
861688 Ixeris chinensis
5795101 Ixeris polycephala
524978 Taraxacum
425562 Taraxacum coreanum
537525 Crepidiastrum
1011858 Crepidiastrum sonchifolium
472093 Scorzonerinae
485929 Scorzonera
443526 Scorzonera austriaca
472096 Hypochaeridinae
914604 Hypochaeris
430228 Hypochaeris ciliata
454640 Nabalus
475293 Nabalus tatarinowii
119073 Hieraciinae
23821 Hieracium
266289 Hieracium virosum
1095913 Hieracium umbellatum
472092 Lactucinae
515705 Lactuca
678386 Lactuca indica
678396 Lactuca sibirica
5536605 Lactuca raddeana
1084160 Asteroideae
757761 Heliantheae alliance
557772 Heliantheae
217669 Xanthium
709045 Xanthium strumarium
578401 Millerieae
300363 Sigesbeckia
922376 Sigesbeckia pubescens
57535 Coreopsideae
759041 Bidens
86785 Bidens cernua
608098 Bidens tripartita
5794538 Bidens parviflora
557774 Eupatorieae
394959 Eupatorium
680373 Eupatorium lindleyanum
1078746 Eupatorium japonicum
556322 Inulinae
587355 Carpesium
20454 Carpesium macrocephalum
587351 Carpesium cernuum
792531 Carpesium triste
864170 Inula
587344 Inula britannica
557768 Senecioneae
349491 Senecioninae
723076 Senecio
754105 Senecio vulgaris
742737 Senecio nemorensis
480260 Jacobaea
47004 Jacobaea argunensis
117029 Jacobaea cannabifolia
117027 Jacobaea cannabifolia var. integrifolia
784012 Tussilagininae
809312 Tephroseris
812359 Tephroseris pierotii
515694 Ligularia
1010107 Ligularia dentata
1083647 Petasites
896532 Petasites frigidus
557765 Anthemideae
701281 Matricariinae
828101 Achillea
195131 Achillea ptarmica
295550 Achillea alpina
666134 Achillea ptarmicoides
127124 Artemisiinae
692375 Chrysanthemum
228065 Chrysanthemum zawadskii
260062 Chrysanthemum oreastrum
465444 Artemisia
33642 Artemisia mongolica
115033 Artemisia gmelinii
119930 Artemisia apiacea
154471 Artemisia sieversiana
246976 Artemisia manshurica
274425 Artemisia lagocephala
723283 Artemisia stolonifera
723285 Artemisia sylvatica
889813 Artemisia scoparia
1034895 Artemisia lavandulifolia
1034915 Artemisia keiskeana
1084166 Astereae
124080 Australasian lineages
409712 Aster
820265 Aster altaicus
608334 Aster indicus
287847 Aster tataricus
387671 Aster incisus
583685 Aster pekinensis
868082 Aster scaber
965682 Aster maackii
129768 Aster ageratoides
264974 Aster alpinus
202600 Callistephus
202596 Callistephus chinensis
445368 North American clade
643717 Erigeron
747367 Erigeron annuus
323007 Erigeron acris
872351 Solidago
541018 Solidago virgaurea
591422 Conyza
1008406 Conyza canadensis
551663 Eurybia (genus in kingdom Archaeplastida)
1078266 Eurybia sibirica
464144 Gnaphalium
569714 Gnaphalium uliginosum
527107 Carduoideae
54957 Echinopsinae
557760 Cardueae
627940 Carduinae
70338 Cirsium
461560 Cirsium pendulum
834316 Cirsium setosum
1083132 Saussurea
12594 Saussurea sinuata
210428 Saussurea pulchella
348575 Saussurea maximowiczii
519497 Saussurea alpina
636952 Saussurea japonica
716972 Saussurea amurensis
1087441 Saussurea umbrosa
5336737 Saussurea manshurica
5794831 Saussurea grandifolia
465432 Arctium
46196 Arctium lappa
597712 Carduus
249618 Carduus crispus
947023 Himalaiella
210424 Himalaiella deltoidea
415803 Cephanonoplos
415796 Cephalonoplos segetum
733916 Hemisteptia
733911 Hemisteptia lyrata
944237 Synurus (genus in kingdom Archaeplastida)
944238 Synurus deltoides
627941 Centaureinae
569928 Serratula (genus in kingdom Archaeplastida)
795404 Serratula coronata
54959 Carlininae
194043 Atractylodes
194037 Atractylodes lancea
557775 Mutisieae
289565 Leibnitzia
289567 Leibnitzia anandria
935663 Adenocaulon
935632 Adenocaulon himalaicum
694622 Menyanthaceae
128308 Nymphoides
128320 Nymphoides peltata
814227 Menyanthes
1069766 Menyanthes trifoliata
1086303 Campanulaceae
94695 Adenophora (genus in kingdom Archaeplastida)
533067 Adenophora remotiflora
94696 Adenophora divaricata
375154 Adenophora polyantha
817781 Adenophora triphylla
796460 Adenophora pereskiifolia
1028669 Adenophora coronopifolia
1078768 Adenophora grandiflora
533064 Asyneuma japonicum
412607 Campanula punctata
412599 Campanula glomerata
1086294 Lobelia
923372 Lobelia sessilifolia
670513 Codonopsis
39962 Codonopsis ussuriensis
1014057 Codonopsis pilosula
141099 Platycodon
141088 Platycodon grandiflorus
372834 Apiales
1091578 Apiineae
372831 Apiaceae
79260 Apioideae
737499 Saposhnikovia
737496 Saposhnikovia divaricata
287549 Peucedanum praeruptorum
428206 Angelica (genus in kingdom Archaeplastida)
86927 Angelica cartilaginomarginata
628503 Angelica anomala
628505 Angelica amurensis
49588 Angelica dahurica
941676 Angelica gigas
56964 Tordylieae
5795230 Tordyliinae
903079 Heracleum
122463 Heracleum moellendorffii
988987 Peucedanum elegans
298526 Careae
626557 Aegopodium
1012750 Aegopodium alpestre
298518 Scandiceae
166290 Scandicinae
105025 Anthriscus
1074874 Anthriscus sylvestris
713247 Sphallerocarpus
713246 Sphallerocarpus gracilis
200257 Osmorhiza
200265 Osmorhiza aristata
166289 Torilidinae
626553 Torilis
251295 Torilis japonica
200263 Ligusticum jeholense
298524 Oenantheae
498471 Cicuta
49609 Cicuta virosa
652844 Sium
652846 Sium suave
251303 Spuriopimpinella
207718 Spuriopimpinella brachycarpa
1085268 Rupiphila
508622 Rupiphila tachiroei
826294 Pleurospermum uralense
686405 Bupleureae
892024 Bupleurum
486734 Bupleurum chinense
49596 Bupleurum scorzonerifolium
213823 Bupleurum komarovianum
49594 Bupleurum longiradiatum
491614 Bupleurum euphorbioides
524079 Araliaceae
480791 Eleutherococcus
631492 Eleutherococcus senticosus
2116 Eleutherococcus sessiliflorus
11192 Kalopanax
488718 Kalopanax septemlobus
524072 Panax
524063 Panax ginseng
426602 Aralia
322272 Aralia elata
210235 Aralia continentalis
520793 Oplopanax
514826 Oplopanax elatus
659705 Dipsacales
69534 Caprifoliaceae
649885 Lonicera
920874 Lonicera chrysantha
660961 Lonicera maackii
980067 Lonicera ruprechtiana
179065 Lonicera nigra
345664 Lonicera maximowiczii
1086606 Lonicera caerulea
589189 Lonicera caerulea var. edulis
3892213 Lonicera praeflorens
6061433 Lonicera subhispida
393341 Valeriana officinalis
245959 Valeriana amurensis
1035979 Patrinia
231856 Patrinia scabiosifolia
518011 Patrinia intermedia
971855 Patrinia villosa
1035977 Patrinia rupestris
965921 Scabiosa
984352 Scabiosa comosa
702435 Zabelia
716019 Zabelia dielsii
30739 Weigela
32944 Weigela praecox
3892230 Weigela floribunda
757494 Adoxaceae
757503 Viburnum
22570 Viburnum burejaeticum
50892 Viburnum koreanum
117453 Viburnum opulus
51731 Viburnum opulus var. sargentii
1042137 Sambucus
357616 Sambucus buergeriana
589181 Sambucus williamsii
953216 Sambucus manshurica
5746340 Sambucus latipinna
757497 Adoxa
1042115 Adoxa moschatellina
648892 Ericales
47346 Primulaceae
655774 Androsace umbellata
550490 Androsace filiformis
10687 Primula sieboldii
993540 Primula farinosa
588639 Primula fistulosa
411957 Lysimachia clethroides
567411 Lysimachia thyrsiflora
680829 Lysimachia davurica
583308 Trientalis
583307 Trientalis europaea
3900204 Lysimachia barystachys
279976 Actinidiaceae
279984 Actinidia
9477 Actinidia polygama
279941 Actinidia kolomikta
686875 Actinidia arguta
66730 Ericaceae
266533 Ericoideae
687688 Rhodoreae
400112 Rhododendron lapponicum
844320 Rhododendron brachycarpum
695232 Rhododendron aureum
226740 Rhododendron dauricum
230077 Rhododendron redowskianum
750202 Rhododendron parvifolium
687700 Empetreae
99440 Empetrum
162780 Empetrum sibiricum
687686 Phyllodoceae
743803 Phyllodoce (genus in kingdom Archaeplastida)
894628 Phyllodoce caerulea
266537 Vaccinioideae
739256 Vaccinieae
820031 Vaccinium
90281 Vaccinium microcarpum
425957 Vaccinium oxycoccos
994130 Vaccinium uliginosum
113550 Gaultherieae
845656 Chamaedaphne
324770 Chamaedaphne calyculata
266552 Pyroloideae
266555 Monotropeae
384083 Monotropastrum
909403 Monotropastrum humile
539572 Monotropa
824795 Monotropa hypopitys
266557 Pyroleae
18684 Pyrola
18686 Pyrola rotundifolia
106231 Pyrola minor
755291 Pyrola renifolia
680178 Chimaphila
235185 Chimaphila japonica
680175 Chimaphila umbellata
680166 Moneses
680168 Moneses uniflora
680187 Orthilia
3900278 Orthilia obtusata
266550 Arbutoideae
622576 Arctous
622571 Arctous rubra
622578 Arctous alpina
6048990 Ramischia
6048991 Ramischia secunda
289350 Balsaminaceae
928414 Impatiens
5920373 Impatiens subgenus Impatiens
5920379 Impatiens sect. Impatiens
730178 Impatiens textorii
6046308 Impatiens furcillata
120960 Hydrangeaceae
943041 Philadelphus
5144125 Philadelphus schrenkii
313785 Deutzia
666760 Deutzia parviflora
266707 Deutzia parviflora var. amurensis
5144122 Deutzia glabrata
737319 Cornaceae
82463 Cornus
869771 Cornus alba
899880 Alangium
414781 Alangium platanifolium
216628 Caryophyllales
317818 Caryophyllaceae
5920014 Sclerantheae
197077 Minuartia
726134 Minuartia arctica
721242 Minuartia rupestris
5494013 Pseudocherleria
6037086 Pseudocherleria laricina
5920016 Sileneae
154053 Silene (genus in kingdom Archaeplastida)
29433 Silene macrostyla
205375 Silene aprica
728693 Silene baccifera
1056623 Silene repens
1069700 Silene firma
4724301 Silene jenisseensis
6037218 Silene capitata
6037402 Silene koreana
159016 Agrostemma
689981 Agrostemma githago
5920005 Caryophylleae
317820 Dianthus
231868 Dianthus chinensis
432192 Dianthus superbus
28652 Gypsophila
5143826 Gypsophila pacifica
5920003 Arenarieae
923720 Moehringia
320848 Moehringia lateriflora
5920000 Alsineae
842191 Cerastium
732786 Cerastium cerastoides
5728334 Cerastium furcatum
6035536 Cerastium baischanense
432723 Stellaria (genus in kingdom Archaeplastida)
83396 Stellaria neglecta
432718 Stellaria media
689100 Stellaria radians
689106 Stellaria longifolia
1020150 Stellaria bungeana
5728499 Stellaria filicaulis
698780 Pseudostellaria
698777 Pseudostellaria heterophylla
1020152 Pseudostellaria davidii
5728472 Pseudostellaria sylvatica
6035668 Pseudostellaria japonica
689113 Myosoton
689095 Myosoton aquaticum
5920012 Sagineae
459770 Sagina
161892 Sagina japonica
694861 Sagina saginoides
978011 Eremogoneae
291840 Eremogone
5740151 Eremogone juncea
788443 Eremogone capillaris
4724279 Camphorosmoideae
4724280 Camphorosmeae
214363 Bassia (genus in kingdom Archaeplastida)
35500 Bassia scoparia
675983 Bassia prostrata
4724258 Chenopodioideae
4724269 Dysphanieae
70222 Teloxys
70221 Teloxys aristata
892400 Chenopodium
892395 Chenopodium album
202588 Chenopodium acuminatum
6037890 Chenopodium bryoniaefolium
4724265 Oxybasis
827221 Oxybasis glauca
4724260 Chenopodiastrum
499425 Chenopodiastrum hybridum
317808 Amaranthus
892638 Amaranthus retroflexus
33109 Cactineae
63150 Portulacaceae
63152 Portulaca
883494 Portulaca oleracea
904376 Polygonaceae
839947 Polygonoideae
839952 Polygoneae
43733 Polygonum
143996 Polygonum aviculare
5746684 Polygonum ajanense
5920107 Polygonum ochotense
362491 Fallopia (genus in kingdom Archaeplastida)
361565 Fallopia multiflora
362471 Fallopia multiflora var. ciliinervis
362478 Fallopia convolvulus
839950 Rumiceae
904386 Rumex
134757 Rumex acetosa
503466 Rumex maritimus
516846 Rumex crispus
3943857 Rumex aquaticus
3943866 Rumex longifolius
3943892 Rumex gmelinii
6040058 Rumex amurensis
666565 Oxyria
514120 Oxyria digyna
839954 Persicarieae
64965 Persicaria
19860 Persicaria orientalis
19864 Persicaria longiseta
64960 Persicaria senticosa
91320 Persicaria perfoliata
113359 Persicaria thunbergii
143983 Persicaria sagittata
146127 Persicaria amphibia
201229 Persicaria viscosa
302163 Persicaria nepalensis
439770 Persicaria maculosa
478811 Persicaria hydropiperoides
775329 Persicaria pubescens
775333 Persicaria nodosa
1006197 Persicaria lapathifolia
896894 Persicaria hydropiper
927769 Persicaria maackiana
1034576 Persicaria sieboldii
1093317 Persicaria mitis
885332 Bistorta
91303 Bistorta vivipara
5746629 Bistorta manshuriensis
6039778 Bistorta elliptica
885322 Koenigia
951115 Koenigia sect. Aconogonon
6039807 Aconogonon limosum
6039814 Aconogonon platyphyllum
14966 Droseraceae
14968 Drosera
845045 Drosera rotundifolia
5740848 Amyridoideae
945891 Dictamnus
651514 Dictamnus dasycarpus
1016455 Phellodendron
1016461 Phellodendron amurense
873718 Santalaceae
298609 Visceae
914230 Viscum
34127 Viscum coloratum
531039 Aceraceae
948922 Acer
403777 Acer tataricum
403798 Acer tataricum subsp. ginnala
190371 Acer barbinerve
814697 Acer pseudosieboldianum
403786 Acer tegmentosum
456199 Acer triflorum
636265 Acer mandshuricum
1050908 Acer truncatum
872975 Ranunculales
387826 Ranunculaceae
5494506 Delphinieae
756111 Aconitum
377294 Aconitum coreanum
384364 Aconitum monanthum
565431 Aconitum alboviolaceum
625491 Aconitum umbrosum
549540 Aconitum volubile
723180 Aconitum volubile var. latisectum
1064661 Aconitum villosum
5737821 Aconitum kirinense
5737824 Aconitum paniculigerum
549539 Aconitum jaluense
6131382 Aconitum dunhuaense
6131390 Aconitum fusungense
518366 Delphinium
259366 Delphinium maackianum
5494510 Adonideae
1011767 Trollius
230029 Trollius macropetalus
752150 Trollius japonicus
841872 Trollius ledebouri
693553 Adonis
243850 Adonis amurensis
5494507 Ranunculeae
387812 Ranunculus
662449 Ranunculus gmelinii
140131 Ranunculus japonicus
162150 Ranunculus chinensis
162159 Ranunculus ficariifolius
310805 Ranunculus repens
645620 Ranunculus pedatifidus
5737628 Ranunculus franchetii
6133084 Ranunculus tachiroei
5494515 Anemoneae
964052 Clematis
21289 Clematis terniflora
446556 Clematis terniflora var. mandshurica
416093 Clematis brevicaudata
594161 Clematis nobilis
594168 Clematis serratifolia
647742 Clematis heracleifolia
661417 Clematis intricata
661436 Clematis macropetala
3945134 Clematis koreana
282621 Clematis fusca
385038 Anemone
889147 Anemone raddeana
897740 Anemone stolonifera
897748 Anemone amurensis
897752 Anemone reflexa
977458 Anemone sylvestris
5737675 Anemone umbrosa
5737678 Anemone rossii
5737679 Anemone baicalensis
5737693 Anemone dichotoma
5737694 Anemone cathayensis
421851 Pulsatilla
542352 Pulsatilla cernua
5494511 Cimicifugeae
693562 Actaea (genus in kingdom Archaeplastida)
462227 Actaea dahurica
462241 Actaea asiatica
462245 Actaea rubra
512693 Actaea simplex
756501 Eranthis
604763 Eranthis stellata
5494514 Caltheae
279703 Caltha
387810 Caltha palustris
449889 Caltha palustris var. membranacea
5745137 Caltha palustris var. sibirica
5479017 Thalictroideae
947697 Enemion
22673 Enemion raddeanum
948059 Isopyrum
949659 Isopyrum manshuricum
190621 Thalictrum
83785 Thalictrum filamentosum
98297 Thalictrum ichangense
243507 Thalictrum simplex
491705 Thalictrum minus
300814 Thalictrum minus var. hypoleucum
815364 Thalictrum aquilegiifolium
985693 Thalictrum aquilegiifolium var. sibiricum
977693 Thalictrum petaloideum
273547 Thalictrum sparsiflorum
338809 Thalictrum tuberiferum
964055 Aquilegia
203768 Aquilegia viridiflora
4724129 Aquilegia japonica
297866 Berberidaceae
1096858 Epimedium
1096860 Epimedium koreanum
5321950 Plagiorhegma
22675 Plagiorhegma dubium
880484 Berberis
803512 Berberis amurensis
190642 Caulophyllum
229365 Caulophyllum robustum
137435 Gymnospermium
987587 Gymnospermium microrrhynchum
964065 Menispermaceae
855362 Menispermum
855369 Menispermum dauricum
438092 Papaveraceae
5478993 Papaveroideae
1030299 Hylomecon
1030293 Hylomecon japonica
957281 Chelidonium (genus in kingdom Archaeplastida)
957283 Chelidonium majus
438104 Fumarioideae
438103 Corydalis
326188 Corydalis ambigua
818452 Corydalis ochotensis
818458 Corydalis pallida
5727965 Corydalis turtschaninovii
5727987 Corydalis speciosa
5728014 Corydalis repens
6130311 Corydalis buschii
6130640 Corydalis watanabei
402694 Adlumia
5728023 Adlumia asiatica
228826 Ceratophyllales
259039 Ceratophyllaceae
10945 Ceratophyllum (genus in kingdom Archaeplastida)
10930 Ceratophyllum demersum (species in kingdom Archaeplastida)
1058517 Liliopsida
5308424 Petrosaviidae
402582 Commelinales
877745 Commelinaceae
865574 Commelina
877757 Commelina communis
3945840 Streptolirion
3945841 Streptolirion volubile
399488 Pontederiaceae
201049 Monochoria
775189 Monochoria korsakowii
921871 Poales
508090 Poaceae
641464 Pooideae
693952 Meliceae
1019667 Glyceria
348701 Glyceria triflora
348703 Glyceria spiculosa
348707 Glyceria leptolepis
5759332 Glyceria effusa
629679 Melica
513347 Melica nutans
3951750 Melica grandiflora
400259 Schizachne
180834 Schizachne purpurascens
5783135 Schizachne purpurascens subsp. callosa
5737322 Poodae
415737 Poeae
990220 Calamagrostis
182562 Calamagrostis purpurea
188845 Calamagrostis epigeios
211787 Calamagrostis pseudophragmites
533165 Calamagrostis arundinacea
3951443 Calamagrostis nivicola
765663 Agrostis
252175 Agrostis clavata
326461 Agrostis vinealis
307879 Agrostis stolonifera
883668 Agrostis hyemalis
3951408 Agrostis divaricatissima
523563 Deyeuxia
3951483 Deyeuxia angustifolia
5783114 Anthoxanthinae
514147 Anthoxanthum
35194 Anthoxanthum monticola
188813 Anthoxanthum odoratum
788433 Anthoxanthum nipponicum
260288 Aveninae
548935 Trisetum
468433 Trisetum sibiricum
534526 Trisetum spicatum
776539 Phalaridinae
651214 Phalaris
408214 Phalaris arundinacea
5759324 Poeae Chloroplast Group 2 (Poeae type)
5783113 Coleanthinae
591700 Puccinellia
820896 Puccinellia tenuiflora
837414 Poinae
985636 Poa
213082 Poa urssulensis
1079463 Poa pratensis
829772 Poa pratensis subsp. pratensis
814183 Poa nemoralis
923698 Poa palustris
478359 Poa arctica
397788 Poa sibirica
476950 Beckmannia (genus in kingdom Archaeplastida)
35191 Beckmannia syzigachne
811929 Cinna
188848 Cinna latifolia
578771 Phleum
578767 Phleum pratense
1085706 Phleum alpinum
538509 Miliinae
35198 Milium
574589 Milium effusum
538506 Holcinae
710008 Deschampsia
58513 Deschampsia cespitosa
107346 Loliinae
202297 Festuca rubra
413007 Festuca vivipara
607063 Festuca extremiorientalis
3950101 Festuca subalpina
3950246 Festuca jacutica
6022358 Festuca supina
5737321 Triticodae
693954 Triticeae
605366 Elymus
84543 Elymus pendulinus
107998 Elymus excelsus
225994 Elymus sibiricus
717042 Elymus nakaii
606189 Elymus ciliaris
415709 Stipeae
521693 Stipa
244439 Stipa sibirica
493875 Achnatherum
343545 Achnatherum pubicalyx
480490 Achnatherum pekinense
700284 Ptilagrostis
267453 Ptilagrostis malyschevii
693955 Bromeae
83458 Bromus
89410 Bromus pumpellianus
5737323 Brylkinieae
180839 Brylkinia
29439 Brylkinia caudata
119852 PACMAD clade
641461 Panicoideae
5737325 Panicodae
475211 Paniceae
5759510 Cenchrinae
553003 Setaria (genus in kingdom Archaeplastida)
552997 Setaria viridis
604449 Setaria pumila
5759516 Boivinellinae
911853 Echinochloa
578578 Echinochloa oryzoides
5759512 Anthephorinae
990860 Digitaria (genus in kingdom Archaeplastida)
443847 Digitaria ciliaris
6023721 Digitaria linearis
5737327 Andropogonodae
475213 Andropogoneae
5759524 Saccharinae
764804 Miscanthus
764796 Miscanthus sinensis
355148 Miscanthus sacchariflorus
100202 Microstegium
100220 Microstegium vimineum
5759521 Arthraxoninae
1095785 Arthraxon
662170 Arthraxon hispidus
119855 Chloridoideae
1001523 Cynodonteae
352571 Muhlenbergiinae
739168 Muhlenbergia
240005 Muhlenbergia japonica
826561 Muhlenbergia huegelii
928157 Eleusininae
990857 Chloris (genus in kingdom Archaeplastida)
457534 Chloris virgata
1001524 Eragrostideae
402224 Eragrostidinae
587232 Eragrostis
527795 Eragrostis cilianensis
245118 Eragrostis pilosa
6023278 Eragrostis poaeoides
657437 Arundinoideae
5737324 Molinieae
651210 Phragmites
712330 Phragmites australis
931271 Juncaceae
545838 Juncus
184505 Juncus wallichianus
898294 Juncus decipiens
523832 Juncus bufonius
523836 Juncus articulatus
1000029 Juncus compressus
3964846 Juncus krameri
3964942 Juncus haenkei
3964959 Juncus maximowiczii
3964983 Juncus papillosus
3964992 Juncus brachyspathus
1000032 Juncus castaneus
790587 Luzula
279112 Luzula wahlenbergii
415275 Luzula pallescens
334525 Luzula multiflora
898298 Luzula capitata
105574 Cyperaceae
423248 Cyperoideae
948813 Cariceae
397268 Carex
2066 Carex neurocarpa
397258 Carex echinata
13994 Carex disperma
193874 Carex stipata
58705 Carex tenuiflora
4163 Carex canescens
2084 Carex laevissima
3591 Carex dispalata
8152 Carex rupestris
3601 Carex drymophila
72498 Carex lyngbyei
111411 Carex capricornis
174055 Carex atrata
236680 Carex ussuriensis
236682 Carex xiphium
236686 Carex uda
304578 Carex humilis
274858 Carex siderosticta
304593 Carex lanceolata
329194 Carex capillacea
354457 Carex eleusinoides
375543 Carex planiculmis
454183 Carex pallescens
525341 Carex peiktusanii
526978 Carex pilosa
576802 Carex media
685450 Carex rhynchophysa
712222 Carex loliacea
729101 Carex erythrobasis
729104 Carex forficula
729199 Carex biwensis
823028 Carex leiorhyncha
847600 Carex vesicaria
862071 Carex maximowiczii
915773 Carex onoei
929916 Carex globularis
3957829 Carex sordida
3957839 Carex humida
3957845 Carex raddei
3957869 Carex siroumensis
3957873 Carex nervata
3957963 Carex pediformis
3958068 Carex appendiculata
3958206 Carex ulobasis
3958229 Carex remotiuscula
3958261 Carex gmelinii
3958501 Carex lithophila
3958539 Carex glossostigma
3958767 Carex tarumensis
3958905 Carex tuminensis
3959025 Carex kirinensis
3959082 Carex meyeriana
3959114 Carex quadriflora
5744553 Carex longerostrata
6020007 Carex orthostachys
267274 Kobresia
980217 Kobresia myosuroides
423245 Cypereae
627033 Cyperus
236676 Cyperus amuricus
1011062 Cyperus difformis
3959325 Cyperus zollingeri
3959513 Cyperus limosus
1054311 Pycreus
3960043 Pycreus setiformis
423246 Fuireneae
91653 Schoenoplectus
265373 Schoenoplectus tabernaemontani
330788 Schoenoplectiella
306799 Schoenoplectiella komarovii
687329 Bolboschoenus
110695 Bolboschoenus planiculmis
423247 Eleocharideae
790600 Eleocharis
449226 Eleocharis mamillata
6020509 Eleocharis intersita
423249 Scirpeae
267284 Scirpus
110691 Scirpus orientalis
110697 Scirpus karuizawensis
262872 Scirpus radicans
3959165 Scirpus maximowiczii
790595 Eriophorum
172456 Eriophorum gracile
444743 Eriophorum latifolium
738895 Eriophorum vaginatum
913639 Eriophorum russeolum
580889 Eriophorum angustifolium
612686 Trichophorum
262878 Trichophorum alpinum
225264 Typhaceae
613197 Typha
17923 Typha angustifolia
613200 Typha latifolia
928468 Sparganium
120800 Sparganium angustifolium
452423 Sparganium stoloniferum
759031 Sparganium glomeratum
3957200 Sparganium subglobosum
6024527 Sparganium minimum
202244 Rohrbachia
293477 Rohrbachia minima
557124 Asparagales
568878 Orchidaceae
22154 Epidendreae
5919167 Calypsoinae
300570 Corallorhiza
826234 Corallorhiza trifida
214453 Oreorchis
214455 Oreorchis patens
1091749 Calypso (genus in kingdom Archaeplastida)
915007 Calypso bulbosa
852745 Orchidoideae
902467 Cranichideae
73431 Spiranthinae
767488 Spiranthes
761190 Spiranthes sinensis
73438 Goodyerinae
762993 Goodyera
584507 Goodyera repens
976665 Orchideae
73433 Orchidinae
193308 Habenaria
3972481 Habenaria linearifolia
621565 Gymnadenia
621560 Gymnadenia conopsea
1045045 Platanthera
3971835 Platanthera densa
48773 Dactylorhiza
904688 Dactylorhiza viridis
878909 Ponerorchis
345401 Ponerorchis cucullata
852741 Neottieae
875532 Neottia
3987792 Neottia acuminata
3987839 Neottia papilligera
243186 Epipactis
3987935 Epipactis papillosa
852744 Cypripedioideae
530301 Cypripedium
108908 Cypripedium calceolus
262104 Cypripedium yatabeanum
836701 Cypripedium macranthos
836708 Cypripedium guttatum
595054 Malaxideae
5919203 Malaxidinae
712370 Liparis (genus in kingdom Archaeplastida)
910530 Liparis japonica
179401 Malaxis
166575 Malaxis monophyllos
714631 Vanilloideae
5715914 Pogonieae
702803 Pogonia
702801 Pogonia japonica
258473 Amaryllidaceae
17701 Allioideae
842374 Allieae
781603 Allium
626975 Allium schoenoprasum
109767 Allium splendens
650740 Allium victorialis
942175 Allium senescens
346334 Allium neriniflorum
386093 Allium macrostemon
412483 Allium monanthum
295698 Allium thunbergii
497701 Allium condensatum
782212 Allium bidentatum
933619 Allium ledebourianum
20731 Polygonatum
62279 Polygonatum humile
204624 Polygonatum inflatum
260689 Polygonatum involucratum
616151 Polygonatum odoratum
727996 Polygonatum acuminatifolium
1089427 Convallaria
1088891 Convallaria majalis
815516 Maianthemum
62298 Maianthemum dilatatum
260679 Maianthemum japonicum
417437 Maianthemum dahuricum
539415 Maianthemum trifolium
361628 Asparagoideae
748368 Asparagus
672862 Asparagus schoberioides
47206 Hyacinthaceae
981235 Hyacinthoideae
781832 Hyacintheae
978714 Scilla
24752 Scilla scilloides
461417 Xanthorrhoeaceae
981234 Hemerocallidoideae
883105 Hemerocallis
631121 Hemerocallis dumortieri
689603 Hemerocallis minor
997485 Streptopus
3995537 Streptopus koreanus
1087540 Iridaceae
229529 Iris (genus in kingdom Archaeplastida)
43094 Iris setosa
373086 Iris mandshurica
740491 Iris domestica
3998435 Iris kobayashii
577328 Iris ensata
258488 Liliales
781605 Liliaceae
616132 Gagea
146931 Gagea triflora
388168 Gagea serotina
748393 Lilium
73787 Lilium pensylvanicum
884626 Lilium concolor
105372 Lilium concolor var. partheneion
105375 Lilium concolor var. buschianum
689072 Lilium amabile
819134 Lilium distichum
689046 Lilium cernuum
172933 Fritillaria (genus in kingdom Archaeplastida)
702585 Fritillaria ussuriensis
545823 Erythronium
545825 Erythronium japonicum
512520 Clintonia
494155 Clintonia udensis
24750 Smilax (genus in kingdom Archaeplastida)
1028033 Smilax riparia
272789 Smilax nipponica
302313 Smilax sieboldii
430236 Melanthiaceae
597431 Paris
1011470 Paris verticillata
76108 Trillium
76103 Trillium camschatcense
603943 Veratrum
290488 Veratrum nigrum
112384 Veratrum maackii
696806 Veratrum dahuricum
538762 Dioscoreales
781627 Dioscoreaceae
474722 Dioscorea nipponica
399481 Alismatales
481972 Araceae
1085578 Lemnoideae
1008186 Lemna
431388 Lemna minor
483437 Lemna trisulca
431386 Spirodela
814207 Spirodela polyrhiza
1085573 Calloideae
668687 Calla
668688 Calla palustris
708549 Arisaemateae
1027662 Arisaema
727020 Arisaema amurense
1059807 Arisaema heterophyllum
3998944 Arisaema peninsulae
905246 Pinellia
281031 Pinellia ternata
1085577 Orontioideae
807895 Symplocarpus
277364 Symplocarpus nipponicus
1058522 Alismataceae
852506 Alisma
484565 Alisma plantago-aquatica
487679 Alisma plantago-aquatica subsp. orientale
526631 Alisma gramineum
481959 Sagittaria (genus in kingdom Archaeplastida)
962775 Sagittaria trifolia
731515 Sagittaria natans
84269 Hydrocharitaceae
785528 Najas
637151 Najas graminea
329862 Vallisneria
146836 Vallisneria asiatica
1027657 Butomaceae
1027656 Butomus
1027653 Butomus umbellatus
399477 Potamogetonaceae
1048840 Potamogeton
30681 Potamogeton pusillus
242996 Potamogeton crispus
306508 Potamogeton distinctus
431968 Potamogeton compressus
6012989 Potamogeton mandschuriensis
460579 Juncaginaceae
561076 Triglochin
4001356 Triglochin palustre
208899 Scheuchzeriaceae
208898 Scheuchzeria
814198 Scheuchzeria palustris
449210 Tofieldiaceae
140475 Tofieldia
862628 Tofieldia coccinea
276683 Acorales
162554 Acoraceae
1008191 Acorus
1008193 Acorus calamus
31010 Magnoliidae
1022514 Piperales
37785 Aristolochiaceae
656376 Aristolochia manshuriensis
451326 Aristolochia contorta
496568 Asarum
232656 Asarum heterotropoides
165801 Asarum heterotropoides var. mandshuricum
188881 Asarum sieboldii
5919699 Asarum sieboldii var. seoulense
373127 Austrobaileyales
1022517 Schisandraceae
70551 Schisandra
639706 Schisandra chinensis
927972 Nymphaeales
583541 Nymphaeaceae
583523 Nymphaea
537195 Nymphaea tetragona