Comments (3)
bgruening
commented on July 24, 2024
@diehlsa hope it's now working for you.
The integrated_tool_panel.xml is a little bit more tricky because a symlink is not valid. If Galaxy detects a symlink as integrated_tool_panel.xml this will be replaced by a new fresh file, not pointing to /export/. So I needed to set it as $GALAXY_CONFIG env as well.
from docker-galaxy-stable.
jmchilton
commented on July 24, 2024
Why would Galaxy do that? Erg... oh well.
from docker-galaxy-stable.
bgruening
commented on July 24, 2024
@jmchilton I have no clue. The problem is that integrated_tool_panel.xml gets rebuild every time a changeset is detected or if the file is missing. Maybe the path-check does not take links into account?
from docker-galaxy-stable.
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from docker-galaxy-stable.