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rails

Ruby on Rails

refinery-platform

The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.

scripts

Miscellaneous scripts

seagull

Friendly Web UI to manage and monitor docker

seqmule

Automated human exome/genome variants detection from FASTQ files

setup-ipsec-vpn

Scripts to build your own IPsec VPN server, with IPsec/L2TP and Cisco IPsec on Ubuntu, Debian and CentOS

shiny-server

Host Shiny applications over the web.

shiny-server-1

My personal Shiny server

shipyard

Composable Docker Management

simple_canvas_game

Quick tutorial on how to make a simple HTML5 Canvas game

spark-gatk

Spark-GATK is a genomics analysis framwork based on Apache Spark and ADAM.

sparklearning

Learning Apache spark,including code and data .Most part can run local.

sparkseq

speck

Browser-based WebGL molecule renderer with the goal of producing figures that are as attractive as they are practical.

spring

FASTQ compression

standard-raxml

star-genome-browser

swamp

Sliding Window Alignment Masker for PAML

test2

three.js

JavaScript 3D library.

tools

BILAB Tools

tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

trcm

TRCMGene: A two-step referential compression method for the efficient storage of genetic data

tripal

The Tripal "core" package, a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. Please use the Drupal project's issue queue at https://www.drupal.org/project/issues/tripal for bug reports and requests.

variantspark

VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information

velvetoptimiser

Automatically optimise three of Velvet's assembly parameters.

vennpainter

A tool for the comparison and identification of candidate genes based on Venn diagrams

voxel-engine

3D HTML5 voxel game engine

wallproxy

wangeditor

wangEditor —— 轻量级web富文本框