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Benny Yu 's Projects

3dmol.js icon 3dmol.js

WebGL accelerated JavaScript molecular graphics library

ace icon ace

Ace (Ajax.org Cloud9 Editor)

adam icon adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.

algopiper icon algopiper

A visual tool to create, run, integrate and share computational pipelines.

aligngraph icon aligngraph

Algorithm for secondary de novo genome assembly guided by closely related references

awesome-pipeline icon awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

bcbb icon bcbb

Incubator for useful bioinformatics code, primarily in Python and R

bcbio-nextgen icon bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bio.jl icon bio.jl

Bioinformatics and Computational Biology Infrastructure for Julia

biojs icon biojs

A library of JavaScript components to represent biological data

bionode icon bionode

Modular and universal bioinformatics

bioweb3d icon bioweb3d

Bio3D an HTML5 visualization tool for biological datasets

blockly icon blockly

The web-based visual programming editor.

cgminer icon cgminer

ASIC and FPGA miner in c for bitcoin

chart.js icon chart.js

Simple HTML5 Charts using the <canvas> tag

checkvcf icon checkvcf

Sanity check Variant Call Format (VCF) files.

cloudbiolinux icon cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

compphy icon compphy

Source code of the CompPhy project.

core icon core

Cloud9 Core - Part of the Cloud9 SDK for Plugin Development

crossbow icon crossbow

Variant calling from sequence reads using cloud computing

cs291 icon cs291

Interactive 3D Graphics class code

data-science icon data-science

:bar_chart: Path to a free self-taught education in Data Science!

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