Name: Austin Soplata
Type: User
Company: EPFL, Blue Brain Project
Bio: Postdoctoral Researcher at the EPFL-Blue Brain Project, simulating the thalamus. He/him. PhD in Computational Neuroscience.
Twitter: asoplata
Location: Geneva, Switzerland
Blog: asoplata.com
Austin Soplata's Projects
My GitHub Frontpage
Code for Austin Soplata's website:
FUTURE Code for Austin Soplata's website
Tools to compute direction vectors in the context of brain atlases.
Tools to compute placement hints in the context of brain atlases.
:sunglasses: Curated list of awesome lists
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
Simple bash scripts that are useful
Brain Modeling Toolkit
The new BU CNSO webpage, hooray!
Brief network analysis and simulation of a C. Elegans connectome.
ca1 repository from 2017, linked to Open Source Brain
An introduction to the practicing neuroscientist to data analysis in Python
DynaSim-compatible mechanism files for simulation of the thalamus of (Ching et al., 2010).
Python script that compares two HDF5 files.
Custom MATLAB code for figure generation of my Dissertation, Chapter 2
DynaSim toolbox for modeling and simulating dynamical systems
DynaSim implementation of the (Bazhenov, et al. 2002) thalamocortical model
DynaSim code and mechanisms for benchmarking to (Brette et al. 2007)
DynaSim implementation of the (Benita et al., 2012) cortical model
DynaSim implementation of the (Ching et al., 2012) model
DynaSim mechanism files for simulating thalamically-extended (Benita et al., 2012) Slow Wave model
DynaSim mechanism files for reproduction of (Krishnan et al., 2016)
DynaSim implementation of the (McCarthy et al., 2008) cortical model
A VERY rough, first-pass Evernote-text-notes converter to Markdown files that I wrote two years ago. USE AT YOUR OWN RISK. Consider it pre-alpha. At the time, it seemed to do the job fine for plaintext Evernote notes.
Needed for NEURON GUI
Copy of (Maurice et al., 2004) code from ModelDB
The mildly ominous parameter exploration toolkit 🛵 - Run huge simulations on distributed clusters, because why not? 🤯
MATLAB MultiDimensional Dictionary class
A python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent