aschuerch / mbbi_computerpracticum Goto Github PK
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License: Other
Home Page: https://aschuerch.github.io/MBBI_ComputerPracticum/
License: Other
Handout - cheatsheet
Share instructor screen with shellshare https://shellshare.net/
wget -qO shellshare https://get.shellshare.net
python shellshare
python shellshare -r workshop
Adjust scheme with skesa
In https://aschuerch.github.io/MBBI_ComputerPracticum/06-redirection/index.html
Exercise
How many sequences in SRR098026.fastq contain at least 3 consecutive Ns?
Solution
We can do it in one step, using the | pipe:
$ grep NNN SRR098026.fastq | wc -l
249
The solution already introduces pipes before pipes are introduced
Update tbl2asn yearly
Delete ">"
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