arvados / arvados-clients Goto Github PK

When ARVADOS_API_HOST is defined, push_pipeline tries to push to that host instead of the one that's defined in .config/arvados

The following error appears when running with ARVADOS_API_HOST=qr1hi.arvadosapi.com and is fixed when ARVADOS_API_HOST is redefined to qr2hi.arvadosapi.com

sguthrie@sguthrie-System-Product-Name:~/git/qr2hi/rsemEBSeq$ push_pipeline.py qr2hi master
WARNING: 'sguthrie/rsemEBSeq' is an alias for 'qr2hi-s0uqq-qozfbt736guld6s'
Counting objects: 12, done.
Delta compression using up to 4 threads.
Compressing objects: 100% (8/8), done.
Writing objects: 100% (8/8), 1.94 KiB | 0 bytes/s, done.
Total 8 (delta 3), reused 0 (delta 0)
To [email protected]:sguthrie/rsemEBSeq.git
   77cbc2f..36f4e78  master -> master
Traceback (most recent call last):
  File "/home/sguthrie/git/arvados-clients/arvados-clients/push_pipeline.py", line 211, in 
    main(sys.stdin, sys.stdout, sys.stderr, sys.argv[1:])
  File "/home/sguthrie/git/arvados-clients/arvados-clients/push_pipeline.py", line 200, in main
    body=pipeline_template).execute()
  File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 140, in positional_wrapper
    return wrapped(*args, **kwargs)
  File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 729, in execute
    raise HttpError(resp, content, uri=self.uri)
arvados.errors.ApiError: 

The arvados_pipeline.ini file is as follows:
[DEFAULT]
template_path = pipeline_templates/rsem-ebseq-mouse.json

[qr2hi]
template_uuid = qr2hi-p5p6p-cla94rm6sewfbue
git_push_url = [email protected]:sguthrie/rsemEBSeq.git