anyone1985 Goto Github PK

learn-algorithms

算法学习笔记

lifestyle.manuscript

Human microbiome of rural and urban populations in Ecuador

maftools

Summarize, Analyze and Visualize MAF files from TCGA or in house studies.

matplotlib_for_papers

Handout for the tutorial "Creating publication-quality figures with matplotlib"

metagenome_assembly_pipeline

A pipeline to go from raw sequencing data to high quality bins and pretty plots.

mhcnuggets

MHCnuggets 1.0

miniquiz

A mini python quiz (Flask example)

mnegri-ov170

Scripts and raw data used by the Annals of Oncology publication by Beltrame et al. (2015)

mutation-signatures

Create mutation signatures from MAF's, and decompose them into Stratton signatures

onco_lnc

pan_cancer

peakmasterng

PeakMaster NG is a graphical user interface for LEMNG model for simulations of capillary zone electrophoresis experiments. PeakMaster NG provides convenient means to enter input data for the LEMNG model and display the results of LEMNG's calculations.

phenoseq

Phenotype sequencing modeling and nextgen sequencing data analysis

phylogeography-in-beast

Inferring spatiotemporal dynamics of H5N1 influenza from sequence data

pipeline

metagenomic analysis server pipeline scripts

proc

Display and analyze ROC curves in R and S+

pvac-seq

A cancer immunotherapy pipeline

pydata-notebook

利用Python进行数据分析 第二版 (2017) 中文翻译笔记

pyside6_sample

pyvcf

A Variant Call Format reader for Python.

qiime

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

qiime16stutorial

A tutorial on methods of 16S analysis with QIIME 1

quizer

Quizer is a simple quiz application written in Python (Using Flask), HTML, CSS and JS.

rna_seq_analysis

no description

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

rtg-tools

RTG Tools: Utilities for accurate VCF comparison and manipulation

scell_lung_adenocarcinoma

This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset

simple-quiz

A simple quiz site built using Flask

single-cell-metabolic-landscape

Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data

single_cell_intestine

R code for single-cell analysis of intestinal epithelial cells