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Ani's Projects

16gt icon 16gt

Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model

18s191 icon 18s191

Course 18.S191 at MIT, Spring 2021 - Introduction to computational thinking with Julia:

2-kupl icon 2-kupl

mapping-free variation detection from DNA-seq data of matched samples

2023-nr-clustering icon 2023-nr-clustering

Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.

aa_stat icon aa_stat

AA_stat tool is for searching uncovering the unexpected modifications of amino acid residues in the protein sequences, as well as possible artifacts of data acquisition or processing, in the results of proteome analyses.

aaronson-oracle icon aaronson-oracle

Press the 'f' and 'd' keys randomly. It's easy. Just use your "free will."

actionlint icon actionlint

:octocat: Static checker for GitHub Actions workflow files

admix-kit icon admix-kit

Toolkit for analyzing genetics data from admixed populations

agentbench icon agentbench

A Comprehensive Benchmark to Evaluate LLMs as Agents

ai-seed icon ai-seed

1000+ ready code templates to kickstart your next AI experiment

aiconfig icon aiconfig

aiconfig -- config-driven, source control friendly AI application development

aim icon aim

Aim — an easy-to-use and performant open-source experiment tracker.

algorithms icon algorithms

Bug-tracking for Jeff's algorithms book, notes, etc.

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