alexchwong Goto Github PK
Name: Alex CH Wong
Type: User
Company: Gene and Stem Cell Therapy Program
Bio: Research Officer
Location: Centenary Institute
Alex CH Wong's Projects
bioconda-recipes
Conda recipes for the bioconda channel.
colab_playground
This is a collection of python notebooks for beginners
dnabert
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
gamlss
This is a fork of gamlss with option to disable verbosity of gamlss::summary()
getitd
Software for FLT3-ITD detection and MRD monitoring assay
nuclei_based_segmentation
This is a nuclei-based cell image segmentation algorithm based on CellProfiling/HPA-Cell-Segmentation
nxtirf
NxtIRF is an interactive shinyDashboard interface for intron retention and alternative splicing analysis
nxtirfcore
NxtIRF quantifies Intron Retention and Alternative Splicing from BAM files using the IRFinder engine. Features interactive visualisation including RNA-seq coverage plots normalised by condition at the splice junction level.
nxtirfdata
Data for NxtIRF
nxtirfgalaxy
NxtIRF as a galaxy app
nxtirfrepo
Github repository for data associated with the NxtIRF family of packages
ompbam
C++ Library for Parallel BAM processing
ompbench
Benchmarking ompBAM vs Rhtslib
scaledyolov4
Scaled-YOLOv4: Scaling Cross Stage Partial Network
splicewiz
SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.
splicewizresources
Extra resources for SpliceWiz
swcore
Minimal dependency implementation of SpliceWiz
testcurlpkg
Test how to make a package that compiles with libcurl
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
yolor
implementation of paper - You Only Learn One Representation: Unified Network for Multiple Tasks (https://arxiv.org/abs/2105.04206)
yolov5
YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite
yolov5_deepsort_pytorch
Real-time multi-object tracker using YOLO v5 and deep sort
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