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datarepo_template's Introduction

Template : Data and code repository

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Description

Add brief description of project

Sequence data

Describe where sequence data can be found and add link LINK.

Folders

  • metadata - Metadata files associated with samples (e.g., phenotype, collection location, sample data, etc).
  • references - Genomic references files (e.g., transcriptome, list of exons, etc).
  • intermediate_files - Intermediate products in the analysis pipeline (e.g., gene count matrix).
  • processed_files - End point products in the analysis pipeline (e.g., List of differentially expressed genes).
  • results - Final manuscript results and supplemental.
  • src - Pipeline and exploratory code.
  • notebook - Notebook catalogging analysis process (optional).

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