Comments (4)
Looks like I have to set
export LC_ALL=C
It seems like a common error when running Discovar on SLurm
from wengan.
Hi,
the setup of LC_ALL=C solved your problem?
best,
Alex
from wengan.
Hi! Yes it did!
from wengan.
Ok, great, I'm going to add that export to the code.
thanks,
best
Alex
from wengan.
Related Issues (20)
- Error 139 HOT 4
- Setting new tmp directory for intermediate files HOT 1
- error2 HOT 3
- asm1.minia.41.contigs.fa] Error 127 HOT 3
- "--clib" flag error in intervalmiss HOT 2
- Using error corrected long reads HOT 2
- Error 137 HOT 4
- Is adapter filtering needed? HOT 1
- Unhandled kmer size HOT 1
- issues with non IUPAC bases HOT 1
- unrecognized command 'iupac2bases'. Abort! HOT 1
- Installatation HOT 1
- SPolished.asm.wengan.fasta] Error 136 HOT 3
- Leveraging ONT raw and PacBio raw HOT 1
- Error 132 - linger
- Wengan error 1 HOT 2
- Error 136
- make: *** [m013330.mk:4: m013330.abyss2-contigs.fa] Error 2 HOT 2
- Unable to install DiscovarDenovo
- Final assembly too small HOT 5
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