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Abate Lab's Projects

abseq icon abseq

Scripts used in the 2016 Abseq paper

barcoding icon barcoding

Tools for evaluating quality of barcoding runs, filtering out low quality data, and counteracting PCR noise

dab-seq icon dab-seq

DAb-seq: combined single-cell DNA genotyping and protein quantification.

mass_spec_image_umap icon mass_spec_image_umap

The scripts here are used to generate the UMAP clustering based on the data of mass spectrum imaging (MSI) by using R and MATLAB.

modulargelbeads icon modulargelbeads

Scripts corresponding to the manuscript "Modular barcode beads for microfluidic single cell genomics"

sic-seq icon sic-seq

Scripts used in the 2017 SiC-seq paper

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