Software requirements:

1- Python version 3.7 or newer.

How to run:

1- Download mag cohorts and shape cohorts folder from the provided link and put them in the Dataset folder.

2- The project is configured to use Nvidea GPU to train/test models. You should be ok if you do not have GPU.

3- Run TS_Classification_DNN.py

4- Choose a method, your GPU core (0 if you do not have GPU), and number of runs in the prompt message.

Please cite this github address if you use this project:

https://github.com/rotroff-lab/Deep_learning_longitudinal_EHR_trajectories/