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deeplung's Introduction

DeepLung

References:

Zhu, Wentao, Chaochun Liu, Wei Fan, and Xiaohui Xie. "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification." IEEE WACV, 2018.

https://github.com/wentaozhu/DeepLung

Dependecies:

Ubuntu 18.04, CUDA 11.0, cudnn 7.6.5, NVIDIA driver 451.67
python 3.7.7, pytorch (1.5.1)
h5py (2.10.0), matplotlib (3.3.0), numpy (1.18.5), nvidia-ml-py (7.352.0), pandas (10.05)
pyparsing (2.4.7), scikit-image (0.17.2), scipy (1.4.1)
SimpleITK (1.2.4)

Docker image

https://hub.docker.com/repository/docker/morpheus9631/jupyter

Download

LUNA16 dataset from https://luna16.grand-challenge.org/data/
LIDC-IDRI dataset from https://wiki.cancerimagingarchive.net/display/Public/LIDC-IDRI

Results:

CAD Analysis:

 Candidate detection results:
  True positives: 985
  False positives: 2649
  False negatives: 67
  True negatives: 0
  Total number of candidates: 5686
  Total number of nodules: 1052
  Ignored candidates on excluded nodules: 2010
  Ignored candidates which were double detections on a nodule: 42
  Sensitivity: 0.936311787
  Average number of candidates per scan: 6.403153153


deeplung's People

Contributors

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