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learning-bioinformatics-at-home

resources for learning bioinformatics

libpku

贵校课程资料民间整理

lincrna

Bioinformatics pipeline to discover novel lincRNAs from high-coverage RNA-Seq datasets

lincrna_mimb

linux-shell-scripting-cookbook-third-edition

Linux Shell Scripting Cookbook Third Edition, published by Packt

lncrna

lncrna-annotation-nf

A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc

lncrna-protein-interaction-prediction

The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predict unknown lncRNA-protein interactions. In this repository, you can find our dataset and code of individual LPLNP, intergrated LPLNP models, and other state-of-the-art methods. Please follow the Guideline.pdf.

lncrna-screen

lncRNA-screen

lncscore

A python package for the identification of lncRNA from the assembled novel transcripts

lncscore-java

Prediction of lncRNA from RNA-Seq data

machine-learning-learning-notes

周志华《机器学习》又称西瓜书是一本较为全面的书籍，书中详细介绍了机器学习领域不同类型的算法(例如：监督学习、无监督学习、半监督学习、强化学习、集成降维、特征选择等)，记录了本人在学习过程中的理解思路与扩展知识点，希望对新人阅读西瓜书有所帮助！

managing-your-biological-data-with-python

managing_your_biological_data_with_python

Codes in this book and Homework(my work) of this bookPython 生物信息学数据管理习题

managing_your_biological_data_with_python_3

<<Managing Your Biological Data with Python>> wirtten in Python 3

metabolomics-in-r

Supporting material for "Processing and visualization of metabolomics data using R"

metaworkflow

Online workflow guidelines for metabolomics

microbiomeprotocol

Microbiome Protocol eBook related documents and scripts.

my-r

a small collection for my R scripts

my_wgcna

ncfans

ncFANs: the first non-coding RNA Function Annotation Server

nextdenovo

Fast and accurate de novo assembler for third generation sequencing (TGS) reads

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

ngs_data_processing

Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.

note

note-of-applied-statistics-with-r

Note-of-Applied-Statistics-with-R

pcc_2e

Online resources for Python Crash Course (Second Edition), from No Starch Press

perl-for-bioinformatics

An attempt to help anyone interested in using Perl for Bioinformatics

personalscripts

PersonalScripts

ph525x

ph525x. functions only, no data