zqzneptune Goto Github PK

affyio

Updated version to handle CEL files

awsome-cell-annotation

babulab

Website for BabuLab

benchelution

Benchmark software packages for scoring biochmical fractionation co-elution data

bioinformatics

Bioinformatics analysis scripts, workflows, general code examples

bulk_rna-seq

Best practices, scripts and workflows for performing bulk RNA-seq expression analyses

callpeaks

Custom peak caller for CUT&TAG data

caln_eu

CALN website

cfrac

A R package for deciphering protein-protein interactions (PPIs) and protein complexes from biomedical fractionation profiles.

copykat

gene_annotations

msblender

Forked from marcottelab/MSblender. Details

ppiapms

[Deprecated]Protein-protein interaction from AP-MS data (ppiAPMS) Please use SMAD(http://bioconductor.org/packages/release/bioc/html/SMAD.html)

refint

RefInt: A curated reference interactome with true positives and negatives for benchmarking protein-protein interactions.

rnaexpresso

R package for transcriptome analysis

rrna-seq

R pipeline for RNA-seq analysis with Salmon

runepic

Run EPIC to predict PPI and macro molecular assemblies from co-elution Data

safe-r

R implementation of the Spatial Analysis of Functional Enrichment (SAFE) algorithm

salmontools

Useful tools for building Salmon Index

scmultiome_analysis_vignette

Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis

shinycitexpresso

A ShinyApp for visualization and explorering Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-seq) data

smad

Latest update of Bioconductor package SMAD

smed

Statistical Modelling of co-Elution Data to infer protein-protein interactions

wccsom

Archived package from CRAN

zqzneptune.github.io

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