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Name: XiaZhao
Type: User
Company: Third Military Medical University
Location: Chongqing
Name: XiaZhao
Type: User
Company: Third Military Medical University
Location: Chongqing
rawdata2visaulaization
American Gut open-access data and IPython notebooks
Statistics and visualization for amplicon data
Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.
R scripts for Analysis of Composition of Microbiomes (ANCOM).
Ensemble Antigen Prediction and Quality Analysis from DNA Variants and Proteins in R
Convert various sequence formats to FASTA
Source code for ScanGEO Shiny App
ATLAS - Three commands to start analysing your metagenome data
A curated list of awesome Bioinformatics software, tools and resources
A flexible pipeline for complete analysis of bacterial genomes
Microbiota-based model improves the sensitivity for detecting colonic lesions
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
:exclamation: This is a read-only mirror of the CRAN R package repository. betareg — Beta Regression
bioBakery tools for meta'omic profiling
bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.
BMI_CRC related microbiome analysis
A collection of scripts to assist with developing networks in BMTK (https://github.com/AllenInstitute/bmtk)
Removing control/background mutations from breseq output index.html
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
CaPSID: Computational Pathogen Sequence IDentification
caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
A tool to circularize genome assemblies
:exclamation: This is a read-only mirror of the CRAN R package repository. COCONUT — COmbat CO-Normalization Using conTrols (COCONUT)
Sequencing and analysis of crAssphage regions from around the globe
Code and analysis results for the CRC shotgun meta-analysis
Curated and processed metagenomic data through ExperimentHub
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.