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bsub_jupyter

Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The name of the connection can be used to reestablish the connection later or to terminate it.

chimera

github for Bioconductor chimera package

docker-bioinf

System for generation of multiple Docker containers for students/users/data scientists

dockers

Public Docker images

fathmm-mkl

Predict the functional consequences of both coding and non-coding single nucleotide variants (SNVs)

gnome-extension-transcode-fonetic-searchapp

Gnome-shell extension makin apps search in launcher layout-idependent for fonetic layout

kronar

add Krona to Shiny

mirnovo

Genome free discovery and classification of miRNAs from small RNA-Seq with random forests

mirrna-mod-pipeline

miRNA modifications identification pipeline

nutrient_calculator

Code for a shinyapp that calculates nutrition values for food and recipes

psadd

PSADD -- PhyloSeq ADDitions

qiaseq-smcounter-v2

scrna.seq.course

Analysis of single cell RNA-seq data course

shortstack

ShortStack: Comprehensive annotation and quantification of small RNA genes

srnaflow

sRNAflow – a tool for analysis of small RNA-seq data

vcf2gedmatch.com

youtube2podcast.r

Convert YouTube channels and playlists to MP3 podcasts.