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3dunetcnn

Keras 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

android-samples

Google Play game services - Android samples

bg-atlasapi

A lightweight python module to interact with atlases for systems neuroscience

bg-atlasgen

Scripts to package BrainGlobe atlases

bigstitcher

ImgLib2/BDV implementation of Stitching for large datasets

bioformatsread

This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but should work with many more image data files thanks to BioFormats.

boxcli

A command line interface for interacting with the Box API.

deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

f-22

FG Aircraft | F-22 from FGUK Hangar

f-35b

FG Aircraft | F-35B

flightgear-mod

Random Collection of Mods for FlightGear Flight Simulator

getdown

Download, Install, Update

ggforce

Accelerating ggplot2

jinn

Java installer

jsyntaxpane

A simple to use Swing JEditorKit component supporting syntax highlighting for various languages.

jsyntaxpanettx

JSyntaxPane used in the Text Trix editor

matplotlib

matplotlib: plotting with Python

mrtree

MRtree R implementation

multiview-reconstruction

Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

optimized-rgb-to-colorname

This API gives closest approximation of an RGB value to a set of color names. It is highly optimized for performance and scalability.

osterttx

Another syntax highlighter for Text Trix based on the Ostermiller Syntax package

pyinstaller

Freeze (package) Python programs into stand-alone executables

python-bioformats

Read and write life sciences file formats

python-javabridge

Python wrapper for the Java Native Interface

radio

RadIO is a library for data science research of computer tomography imaging

raisr

A Python implementation of RAISR

rtd-tutorial

scdc

SCDC

scikit-image

Image Processing SciKit (Toolbox for SciPy)

seurat

R toolkit for single cell genomics