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along_ax

Scripts for calcium sensors translocations registration along the axon

b-fret

Extract FRET signals from noisy FRET data using Bayesian statistical inference

bds-3_python_intro

caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

ch_calc

Channels crosstalk calculator for multiple fluorophore confocal imaging

dec_dance

experiments with Richardson-Lucy deconvolution algorithm

demo

personal experiments

domb-napari

napari plugin for analyzing fluorescence-labeled proteins redistribution

domb-tools

DoMB Tools: Python toolkit of Department of Molecular Biophysics

flowdec

TensorFlow Deconvolution for Microscopy Data

for-lab-needs

Pieces of code for the needs of Systems Biology laboratory at Institute of Molecular Biology and Genetics of NASU, Kyiv, Ukraine

fretrans

Intensity-based FRET efficiency calculation for live-cell imaging data

glt_conut

heka_reader

Python module for reading HEKA PatchMaster data files

hipocount-napari

Quantitative analysis of immunofluorescence images of hippocampal slices

iris-hep.github.io-source

Institute for Research and Innovation in Software for High Energy Physics

kinetofluo

labnote

Lab 404

lerosphere

Cell detection on phase contrast images

ltd_loc

Analysis of HPCA translocation during LTD induction in CA1 neurons culture

ltdata

NCS role in NMDAR-dependent LTD. Analysis of widefield microscopy multichannel data.

machine_learning_pure_python

Some machine learning algorithms implemented in python (with numpy)

microca

model_exp

Experiments with calcium sensors kinetic models.

num-methods-for-pdes

Lecture material on numerical methods for partial differential equations.

otiff

OIF - tiff converter

simplyfire

customizable electrophysiology analysis software

siteset

Toolkit for integrative analysis RNA's functional sites

stof

DIY arduino-base F-stop timer for optical printing

trans_scripts

Scripts for analyzing translocations of fluorescenet-labeled proteins.