willmclaren Goto Github PK
Name: William McLaren
Type: User
Company: Global Gene Corp
Name: William McLaren
Type: User
Company: Global Gene Corp
Cancer Hotspots
Genotype Imputation Pipeline for H3Africa
Dockerfile to build a container with the EnsEMBL Perl API and tools installed
The Ensembl Core Perl API and SQL schema
Ensembl Funcgen Perl API and SQL schema
File parsing and writing code for Ensembl
Language agnostic RESTful data access to Ensembl data over HTTP
Test libraries and harnesses used for running the Ensembl test suite
Ensembl tools including the VEP
The Ensembl Variation Perl API and SQL schema
The Variant Effect Predictor predicts the functional effects of genomic variants
The code to run an Ensembl website
A collection of XS modules to be used with the Ensembl APIs
Ensembl's Automated QC Framework
An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed
Convert JSON schema to Opensearch / Elasticsearch mappings
A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Future development will revolve around critical extensions to the core file format (multiallelic variants, dosage, phase).
Linking GWAS studies to genes through cis-regulatory datasets
Plugins for an Ensembl website
A cancer immunotherapy pipeline
Pytest Fixtures that let you actually test against external resource (Postgres, Mongo, Redshift...) dependent code.
AWS lambda for Ensembl VEP
Python libraries for parsing VCFs produced by Ensembl VEP
Plugins for the Ensembl Variant Effect Predictor (VEP)
Web interface to search VEP results in elasticsearch index
Miscellaneous bits of code for my consumption only
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.