Comments (2)
Hi!
Our repository is under MIT liscense. We encourage you to integrate our model into your application. Any feedback about SaProt's performace is welcome!
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Hi @LTEnjoy,
I'll try to give some feedback. Thank you for your prompt reply!
from saprot.
Related Issues (20)
- Back Translate 3Di Tokesn to PDB Format HOT 5
- Some weights of EsmModel were not initialized from the model checkpoint HOT 2
- Wrong link to hugging face model HOT 1
- Getting protein embeddings HOT 5
- Additional input values generated by the tokenizer HOT 5
- Unable to Open Downstream Task MDB Files in Access After Downloading from GitHub Tutorial HOT 2
- Release code about Contact Head prediction and evaluation HOT 2
- Setting my configuration to for SaProt_650M_AF2 HOT 1
- Downstream Annotation task 'EC/GO' finetuning overfitting HOT 3
- The meaning of output size HOT 2
- The length of the Metal Ion Binding dataset is different from that in the paper HOT 2
- Why is the length of the SA-token sequence not equal to the length of the model outputs? HOT 1
- EC GO results HOT 3
- pretraining esm2_t33_650M_UR50D HOT 3
- Foldseek can't be used HOT 2
- Finetuning GPU memory cost HOT 2
- Mismatch between ESM2 pretraining dataset and SaProt pretraining dataset HOT 1
- per residue representations HOT 2
- Problem of 'Some weights of EsmForMaskedLM were not initialized from the model checkpoint at ./SaProt_model and are newly initialized' HOT 1
- 'utf-8' codec can't decode byte 0x80 in position 64: invalid start byte HOT 1
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