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Jan Walach's Projects

biomarker icon biomarker

The package for identification of biomakers and outlier diagnostics as described in paper 'Robust biomarker identification in a two-class problem based on pairwise log-ratios'

cellrplr icon cellrplr

Package for paper: Cellwise outlier detection and biomarker identification in metabolomics based on pairwise log-ratios, J.Walach, P.Filzmoser, S.Kouril, D. Friedecky, T.Adam, submitted

hsvshift icon hsvshift

Color shift from RGB to HSV for improvement of classification performance of images

image-processing-methods icon image-processing-methods

My Master thesis: "Image processing methods ". The main goal of the Thesis is to explore several image processing methods focused on edge detection and thresholding, then use these methods to implement a program code for automatic evaluation of data sets from a phenotyping line. The Thesis topicis part of a larger research conducted in cooperation with the Centre of the Region Hana for Biotechnological and Agricultural Research.

pretreatment icon pretreatment

Two normalization methods. In order to run pretreatment package devtools package must be installed, then do library('devtools') and install_github('walachja/pretreatment'). More description can be found in Data Analysis for Omic Sciences: Methods and Applications (to appear)

quality-of-czech-vowels icon quality-of-czech-vowels

My Bachalor thesis "Evaluation of vowel quality by means of the formant theory and Fourier Analysis ". Matlab code let you record certain czech vowel, then classify it and show you how well it was pronounced.

stargate-analysis icon stargate-analysis

Analysis of transcripts of my favorite TV show Stargate: SG-1. The script will web scrape transcrips of all episodes and count the number of words said by each main character by season. As expected, Teal'c is not very talkative.

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