Comments (7)
Does folder 'C:/GGIR/output_2g_control' exists?
Is there a file inside the folder 'C:/GGIR/output_2g_control/meta/basic'?
Either no data is saved after part 1 or the data is save somewhere else.
Some suggestions:
- Remove the _ from the data folder name. It might be that this confuses the code.
- Check that you have read&write permissions to the folders or drive you are saving to
- Try using a different folder location
Please let me know whether any of these suggestions addresses the issue
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Hi Vincent
Thank you for your reply. In response to your queries:
Yes, part 1 of GGIR seems to work fine, therefore producing a R meta file for each raw file. A results folder is also produced but inside only has a QC folder inside. In the results folder is a file containing the filelocationkey and R sessioninfo_part1 file but no part2_daysummary or part_2summary.
I have removed all _from raw and output folders, still part 2 failed with the same error message.
I have checked the read & write permissions, still part 2 failed with the same error message.
I have changed the location and drive of the folder location and still part 2 failed with the same error message.
Any further help that you could offer is greatly appreciated.
Kind Regards
Debbie
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Can you upload the .RData file that comes out of part1 here? or if it includes patient sensitive information then email it to me.
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Hi Vincent,
For ease, we can use this thread for communicating. I've emailed my sessioninfo_part1 data if you'd like a 2nd example to Debbie's post. Github won't allow a .RData upload. Let me know if you'd like it uploaded in another way.
Thank you!
Jonathan
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from ggir.
Please see my response to the same issue here: #32. In short, the outputdir argument is probably not correctly specified.
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I assume this issue can be closed with listed in solution #32 and/or googlegroup:
https://groups.google.com/forum/#!topic/rpackageggir/RY8wzp7_Dos/discussion.
Thanks
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