Comments (2)
@liliblu sorry for the late reply!
This package provides the Louvain algorithm, as described by Blondel, Guillaume, Lambiotte, and Lefebvre (2008). The modularity optimizer from http://www.ludowaltman.nl/slm/ is an in improvement of the Louvain algorithm, which is called the Smart Local Moving algorithm. Together with the authors of that algorithm, we recently created the Leiden algorithm, which is a further improvement, being both faster and better than the original Louvain algorithm. The Leiden algorithm is available as a Python package leidenalg
.
I believe you can also use the Leiden algorithm in seurat, but I am not too familiar with that package, so I can't help you with that.
from louvain-igraph.
No problem! Thank you so much for the guidance, that clears it up really well. I am definitely incorporating leidenalg, it's working great!
Thanks again.
from louvain-igraph.
Related Issues (20)
- Weighted modularity not correct? HOT 3
- buildcfg.replace_static_libraries should avoid libm HOT 1
- How to cite the package HOT 1
- Weighted graph parameter HOT 3
- Do not know how to install louvain HOT 13
- "library not found for -lSystem" on mac due to old gcc via brew HOT 1
- issue installing louvain due to new naming of igraph? HOT 2
- Installation error HOT 4
- problem with running the code using ANACONDA HOT 3
- install louvain issue for macOS HOT 3
- `louvain.set_rng_seed` throws error in current release HOT 4
- Is there a way to convert igraph.find_partition result in a dictionary with the original node ids in python? HOT 5
- failed installation on macOS big sur with m1 chip HOT 1
- No longer builds with setuptools 58 HOT 6
- module 'louvain' has no attribute 'RBConfigurationVertexPartitionWeightedLayers HOT 2
- BaseException: Could not construct partition: vector HOT 6
- How should I assign weights to different layers when doing community detection? HOT 1
- legacy-install-failure in pip install louvain HOT 3
- Support python-igraph 0.11 HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from louvain-igraph.