usda-vs Goto Github PK
Name: USDA-VS
Type: Organization
Bio: USDA-Veterinary Services
USDA-VS's Projects
fastq_data_set-brucella
Brucella FASTQ test files
fastq_data_set-tb_complex
flumina
A pipeline for the analysis of Illumina sequence data from Influenza viruses
genoflu
Influenza data pipeline to automate genotyping assignment
minimum_fastqs
testing files: smallest file size and still complete through vSNP_step1.py
nahln_amr
nvsl_bioinformatic_training
The NVSL Bioinformatics Workshop will feature training on command-line bioinformatic tools, processes, and resources routinely used at NVSL for diagnostic testing.
vcf_test_files
A small set of VCFs with expected output tables for script testing
vsnp
vSNP -- validate SNPs
vsnp3
vSNP -- validate SNPs
vsnp3_test_dataset
Dataset for testing vSNP version 3 installation
vsnp_archive
Archived versions of vSNP
vsnp_reference_options
vSNP supporting files
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