Name: Upendra Kumar Devisetty
Type: User
Company: Greenlight Biosciences
Bio: I am Head of Data Science at Greenlight Biosciences working to answer compelling questions to enable discovery and novel insights from Biological data
Twitter: upendra_35
Location: Durham, North Carolina
Blog: http://upendrak.github.io
Upendra Kumar Devisetty's Projects
Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
Demographic analysis of Aspen trees
Transformation from an additive to ultrametric tree
A simple app which would be deployed to aws to demonstrate a django app deployment
Ballgown R package for RNA-seq differential expression analysis
Validated, scalable, community developed variant calling and RNA-seq analysis
Conda recipes for the bioconda channel.
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs (v2.0)
Automatically exported from code.google.com/p/cpat
Scripts to synchronize Singularity images to a CVMFS repository.