Comments (4)
gijzelaerr
commented on July 19, 2024
after modifying some imports (removing relative (from . import bla) I'm able to run the test file directly:
λ HDF5_PLUGIN_PATH=../.lib PYTHONPATH=.. ../.venv3/bin/python test_h52fil.py
blimpy.waterfall INFO Conversion time: 0.11sec
blimpy.file_wrapper WARNING Selection size of 0.06 GB, exceeding our size limit 0.00 GB. Instance created, header loaded, but data not loaded, please try another (t,v) selection.
blimpy.waterfall INFO Detecting high frequency resolution data.
blimpy.waterfall INFO Using 1 n_blobs to write the data.
blimpy.waterfall INFO Reading 1 of 1
blimpy.waterfall INFO Conversion time: 0.19sec
blimpy.waterfall INFO Conversion time: 0.12sec
It looks like you run the test from the source checkout but it is importing blimpy code from an older instllation?
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gijzelaerr
commented on July 19, 2024
forcing the PYTHONPATH to your blimpy source folder should solve this issue. An alternative is to bundle the test files with the installation, which is probably not what you want since it is quite big.
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gijzelaerr
commented on July 19, 2024
@jeenriquez is this solved by setting the PYTHONPATH properly?
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jeenriquez
commented on July 19, 2024
that fixed it! Thanks Gijs.
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Related Issues (20)
- Try to remove HDF5 files that cannot be fully written due to an exception
- Inadvertently, testing is using the previous release
- Utility stax has time-axis issues
- Emit more useful write-blob messages - Filterbank and HDF5
- GuppyFile.get_data() raises StopIteration HOT 3
- Need a tool for patching the header source_name in an HDF5 file
- Support FBH5 version 2.0 reporting HOT 1
- fil2h5, h52fil, dice, and bl_scrunch can mangle the output file name
- Enhance rawhdr to focus on critical header fields for rawspec
- guppi.py assumes that numbers without periods are integers
- examine_h5 in hdf_reader.py is loading too much data
- Plotting fails plt.show() and this should work for X-terminals HOT 3
- Waterfall from existing data array + header dict combo currently broken (`setup_freqs()` missing) HOT 7
- Typo in `waterfall.py` HOT 2
- Introduce Filterbank file downsampling capability
- Need to initialise more container fields for the data_array + header case for Waterfall
- Enhance dsamp to output SIGPROC (.fil) files as well as .h5 files
- Add detailed testing to streaming Waterfall objects
- bl_scrunch never really worked correctly! )-:
- hdf5plugin.Bitshuffle's lz4 argument is deprecated, use cname='lz4' or 'none' instead
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