Setting up about atom HOT 13 CLOSED

What OS are you on? Is it macOS? Also, can you check in your site-packages directory if the atom directory is present? Also, how can you run import atom; atom.__version__ 5.1.1 if you weren't able to import it in the first place?

from atom.

using Win 10. It is in site-packages directory.
If I use pip to show it I get
(basicai) C:\Users\User>pip show atom_ml
WARNING: Ignoring invalid distribution -ttpx (c:\users\user\anaconda3\envs\basicai\lib\site-packages)
Name: atom-ml
Version: 5.1.1
Summary: A Python package for fast exploration of machine learning pipelines
Home-page:
Author:
Author-email: Mavs [email protected]
License:
Location: c:\users\user\anaconda3\envs\basicai\lib\site-packages

I am trying to use it in a jupyter notebook

from atom.

Ok, so it is installed but for some reason it can not be imported. Maybe your pythonpath is wrong? what happens when you copy the atom-ml directory from site-packages to your current working directory?

from atom.

I get this

ModuleNotFoundError Traceback (most recent call last)
~\AppData\Local\Temp\ipykernel_16608\3307495225.py in
----> 1 import atom

~\atom_init_.py in
8 """
9
---> 10 from atom.api import ATOMClassifier, ATOMModel, ATOMRegressor
11 from atom.utils import version

~\atom\api.py in
14 from sklearn.base import clone
15
---> 16 from atom.atom import ATOM
17 from atom.basetransformer import BaseTransformer
18 from atom.utils import INT, SCALAR, SEQUENCE, TARGET, Predictor

~\atom\atom.py in
22 from sklearn.utils.metaestimators import available_if
23
---> 24 from atom.baserunner import BaseRunner
25 from atom.basetransformer import BaseTransformer
26 from atom.branch import Branch

~\atom\baserunner.py in
21 from sklearn.utils.metaestimators import available_if
22
---> 23 from atom.basemodel import BaseModel
24 from atom.basetracker import BaseTracker
25 from atom.basetransformer import BaseTransformer

~\atom\basemodel.py in
21
22 import dill as pickle
---> 23 import mlflow
24 import numpy as np
25 import pandas as pd

ModuleNotFoundError: No module named 'mlflow'

from atom.

oke, in this case you are missing some dependencies. are you sure you installed atom in the same environment your kernel is on? could you try and reinstall atom again and see if the output changed? or just install mlflow separately.

from atom.

I'm new at this but as I can install other packages happily and I'm getting errors with this one is the problem more likely to be with the package in some way? I'm not keen on putting directories and files all over the place. I'm trying to keep it tidy in virtual environments.

from atom.

I have tried installing it in another virtual environment by itself and got
~\atom\utils.py in
28
29 import mlflow
---> 30 import modin.pandas as md
31 import numpy as np
32 import pandas as pd

ModuleNotFoundError: No module named 'modin'

from atom.

are you using pip or conda? In the new env the error is clear. you are missing the modin package, which is a dependency of atom. The question is why isn't it being installed with the package. I tried it myself in a new virtual env and it works fine, so I am not sure it's the package

from atom.

I've been using pip rather than conda

from atom.

Tried with conda
(basicai) C:\Users\User>conda config --set channel_priority strict

(basicai) C:\Users\User>conda install atom-ml
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

• atom-ml

Current channels:

• https://repo.anaconda.com/pkgs/main/win-64
• https://repo.anaconda.com/pkgs/main/noarch
• https://repo.anaconda.com/pkgs/r/win-64
• https://repo.anaconda.com/pkgs/r/noarch
• https://repo.anaconda.com/pkgs/msys2/win-64
• https://repo.anaconda.com/pkgs/msys2/noarch

To search for alternate channels that may provide the conda package you're
looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

from atom.

you need to use conda install -c conda-forge atom-ml. But still, it should work with pip. It looks to me that the issue is related to environments. I think you didn't install atom in the same env as your kernel is running. That's why, when you import atom from the directory you copy pasted, it misses some dependencies.

from atom.

Agreed there is something environmental going on.. However I've got it running on Google Colab so all Good!!! Thank you for your help. This can be closed as far as I am concerned

from atom.

alright. don't hesitate to open a new issue if something else arises

from atom.