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Chao Pan's Projects

2ddna icon 2ddna

Official implementation for 2DDNA image storage platform (Nature Communications)

auto-castp-analysis icon auto-castp-analysis

Run castp analysis (http://sts.bioe.uic.edu/castp/calculation.html) directly from code.

c1gamesstarterkit icon c1gamesstarterkit

Starter kit for new players of Terminal. Contains starter-algo and a basic CLI for running/debugging algo's locally.

chromatin_dl icon chromatin_dl

Dictionary learning for ChIA-Drop experiments with online convex matrix factorization

dp-gnn icon dp-gnn

DP-GNN design that ensures both model weights and inference procedure differentially private (NeurIPS 2023)

ecole icon ecole

Extensible Combinatorial Optimization Learning Environments

fingpt icon fingpt

Data-Centric FinGPT. Open-source for open finance! Revolutionize 🔥 We release the trained model on HuggingFace.

generative_inpainting icon generative_inpainting

DeepFill v1/v2 with Contextual Attention and Gated Convolution, CVPR 2018, and ICCV 2019 Oral

graph_unlearn icon graph_unlearn

Unlearning Graph Classifiers with Limited Data Resources (TheWebConf 2023)

metaoptnet icon metaoptnet

Meta-Learning with Differentiable Convex Optimization (CVPR 2019 Oral)

mmskeleton icon mmskeleton

A OpenMMLAB toolbox for human pose estimation, skeleton-based action recognition, and action synthesis.

modifiedbasesanalysis icon modifiedbasesanalysis

Official implementation of paper "Expanding the Molecular Alphabet of DNA-Based Data Storage Systems with Nanopore Readouts" (Nano Letters)

mufc icon mufc

A federated clustering approach with the corresponding unlearning mechanism (ICLR 2023)

mvae icon mvae

Mixed-curvature Variational Autoencoders (ICLR 2020)

poincarelinearclassification icon poincarelinearclassification

Official implementation of Highly Scalable and Provably Accurate Classification in Poincaré Balls (ICDM regular paper 2021)

query_kmeans icon query_kmeans

Implementation of query k-means algorithm (Neurips 2018)

sc_mvae icon sc_mvae

Mixed-curv VAE with new functionalities

sgc icon sgc

official implementation for the paper "Simplifying Graph Convolutional Networks"

sgc_unlearn icon sgc_unlearn

Certified (approximate) machine unlearning for simplified graph convolutional networks (SGCs) with theoretical guarantees (ICLR 2023)

tailfindr icon tailfindr

An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.

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